"Fossies" - the Fresh Open Source Software Archive
"Fossies" - the Fresh Open Source Software Archive
Fossies downloads: / linux / misc / Augustus-3.5.0.tar.gz (tar.bz2|tar.xz|zip)
Fossies services: Doxygen documentation | Diffs report | CLOC analysis | Meta information
Original URL: https://github.com / Gaius-Augustus / Augustus / archive/refs/tags/v3.5.0.tar.gz
Home page: https://bioinf.uni-greifswald.de/webaugustus/
VirusTotal check: Ok
Member paths+URLs: Shortened | full
Member sort order: docs related | original | size (top100) | date | path | name | ext | top-path files
2022-09-23 19:06
206 2022-09-23 19:06 .dockerignore
2022-09-23 19:06 .github/
2022-09-23 19:06 .github/workflows/
4187 2022-09-23 19:06 .github/workflows/build_and_test.yml
3178 2022-09-23 19:06 .github/workflows/execute_nightly_tests.yml
1931 2022-09-23 19:06 .gitignore
1763 2022-09-23 19:06 Dockerfile
2465 2022-09-23 19:06 Makefile
4094 2022-09-23 19:06 README.md
2227 2022-09-23 19:06 Singularity.def
2022-09-23 19:06 auxprogs/
442 2022-09-23 19:06 auxprogs/Makefile
2022-09-23 19:06 auxprogs/aln2wig/
357 2022-09-23 19:06 auxprogs/aln2wig/Makefile
12275 2022-09-23 19:06 auxprogs/aln2wig/aln2wig.c
2022-09-23 19:06 auxprogs/auxBamFilters/
545 2022-09-23 19:06 auxprogs/auxBamFilters/README
1226070 2022-09-23 19:06 auxprogs/auxBamFilters/eg1.s.bam
1483995 2022-09-23 19:06 auxprogs/auxBamFilters/eg2.bam
176 2022-09-23 19:06 auxprogs/auxBamFilters/operation_H_filter.txt
176 2022-09-23 19:06 auxprogs/auxBamFilters/operation_N_filter.txt
478 2022-09-23 19:06 auxprogs/auxBamFilters/toyAlignments.bam
2022-09-23 19:06 auxprogs/bam2hints/
1061 2022-09-23 19:06 auxprogs/bam2hints/Makefile
754 2022-09-23 19:06 auxprogs/bam2hints/README
38174 2022-09-23 19:06 auxprogs/bam2hints/bam2hints.cc
2022-09-23 19:06 auxprogs/bam2wig/
2544 2022-09-23 19:06 auxprogs/bam2wig/Makefile
1467 2022-09-23 19:06 auxprogs/bam2wig/README.md
5893 2022-09-23 19:06 auxprogs/bam2wig/bam2wig.c
2022-09-23 19:06 auxprogs/compileSpliceCands/
466 2022-09-23 19:06 auxprogs/compileSpliceCands/Makefile
49092500 2022-09-23 19:06 auxprogs/compileSpliceCands/chr21.fa
14028 2022-09-23 19:06 auxprogs/compileSpliceCands/compileSpliceCands.c
2043 2022-09-23 19:06 auxprogs/compileSpliceCands/list.c
758 2022-09-23 19:06 auxprogs/compileSpliceCands/list.h
121942 2022-09-23 19:06 auxprogs/compileSpliceCands/out.gff
2022-09-23 19:06 auxprogs/filterBam/
157 2022-09-23 19:06 auxprogs/filterBam/Makefile
2281 2022-09-23 19:06 auxprogs/filterBam/README.md
2022-09-23 19:06 auxprogs/filterBam/data/
3017 2022-09-23 19:06 auxprogs/filterBam/data/example_data.about.txt
620 2022-09-23 19:06 auxprogs/filterBam/data/example_paired.bam
4297 2022-09-23 19:06 auxprogs/filterBam/data/example_single.bam
2022-09-23 19:06 auxprogs/filterBam/src/
6639 2022-09-23 19:06 auxprogs/filterBam/src/BamSeqLibAccess.cc
7020 2022-09-23 19:06 auxprogs/filterBam/src/BamToolsAccess.cc
2468 2022-09-23 19:06 auxprogs/filterBam/src/Makefile
56372 2022-09-23 19:06 auxprogs/filterBam/src/filterBam.cc
2022-09-23 19:06 auxprogs/filterBam/src/functions/
2014 2022-09-23 19:06 auxprogs/filterBam/src/functions/MatePairs.cc
1773 2022-09-23 19:06 auxprogs/filterBam/src/functions/PairednessCoverage.cc
9099 2022-09-23 19:06 auxprogs/filterBam/src/functions/initOptions.cc
402 2022-09-23 19:06 auxprogs/filterBam/src/functions/printElapsedTime.cc
2022-09-23 19:06 auxprogs/filterBam/src/headers/
4317 2022-09-23 19:06 auxprogs/filterBam/src/headers/bamaccess.hh
5013 2022-09-23 19:06 auxprogs/filterBam/src/headers/bamseqlibaccess.hh
4664 2022-09-23 19:06 auxprogs/filterBam/src/headers/bamtoolsaccess.hh
2020 2022-09-23 19:06 auxprogs/filterBam/src/headers/filterBam.h
2022-09-23 19:06 auxprogs/homGeneMapping/
1488 2022-09-23 19:06 auxprogs/homGeneMapping/Dockerfile
301 2022-09-23 19:06 auxprogs/homGeneMapping/Makefile
4869 2022-09-23 19:06 auxprogs/homGeneMapping/README.TXT
813 2022-09-23 19:06 auxprogs/homGeneMapping/TODO.TXT
2022-09-23 19:06 auxprogs/homGeneMapping/include/
3439 2022-09-23 19:06 auxprogs/homGeneMapping/include/bitmasking.hh
6588 2022-09-23 19:06 auxprogs/homGeneMapping/include/gene.hh
8460 2022-09-23 19:06 auxprogs/homGeneMapping/include/genome.hh
4984 2022-09-23 19:06 auxprogs/homGeneMapping/include/projectio.hh
2651 2022-09-23 19:06 auxprogs/homGeneMapping/include/sqliteDB.hh
2022-09-23 19:06 auxprogs/homGeneMapping/src/
2390 2022-09-23 19:06 auxprogs/homGeneMapping/src/Makefile
6953 2022-09-23 19:06 auxprogs/homGeneMapping/src/gene.cc
28544 2022-09-23 19:06 auxprogs/homGeneMapping/src/genome.cc
12747 2022-09-23 19:06 auxprogs/homGeneMapping/src/main.cc
2637 2022-09-23 19:06 auxprogs/homGeneMapping/src/sqliteDB.cc
2022-09-23 19:06 auxprogs/joingenes/
618 2022-09-23 19:06 auxprogs/joingenes/Makefile
28094 2022-09-23 19:06 auxprogs/joingenes/jg_ios.cpp
844 2022-09-23 19:06 auxprogs/joingenes/jg_ios.h
67523 2022-09-23 19:06 auxprogs/joingenes/jg_transcript.cpp
18463 2022-09-23 19:06 auxprogs/joingenes/jg_transcript.h
17678 2022-09-23 19:06 auxprogs/joingenes/joingenes.cpp
2022-09-23 19:06 auxprogs/utrrnaseq/
1624 2022-09-23 19:06 auxprogs/utrrnaseq/Makefile
1905 2022-09-23 19:06 auxprogs/utrrnaseq/README
2022-09-23 19:06 auxprogs/utrrnaseq/doc/
400 2022-09-23 19:06 auxprogs/utrrnaseq/doc/README
119285 2022-09-23 19:06 auxprogs/utrrnaseq/doc/reference.pdf
4477 2022-09-23 19:06 auxprogs/utrrnaseq/doc/reference.tex
64034 2022-09-23 19:06 auxprogs/utrrnaseq/doc/utrrnaseq.doxyfile
2022-09-23 19:06 auxprogs/utrrnaseq/evaluation/
589 2022-09-23 19:06 auxprogs/utrrnaseq/evaluation/README
2022-09-23 19:06 auxprogs/utrrnaseq/evaluation/final-ref-utrs/
723 2022-09-23 19:06 auxprogs/utrrnaseq/evaluation/final-ref-utrs/README
10324 2022-09-23 19:06 auxprogs/utrrnaseq/evaluation/final-ref-utrs/final.ref.utrs.lst
5194 2022-09-23 19:06 auxprogs/utrrnaseq/evaluation/final-ref-utrs/final.ref.utrs.test.lst
5171 2022-09-23 19:06 auxprogs/utrrnaseq/evaluation/final-ref-utrs/final.ref.utrs.train.lst
2022-09-23 19:06 auxprogs/utrrnaseq/evaluation/final-start-stop/
674 2022-09-23 19:06 auxprogs/utrrnaseq/evaluation/final-start-stop/README
26126 2022-09-23 19:06 auxprogs/utrrnaseq/evaluation/final-start-stop/final.start_stop.gff
13180 2022-09-23 19:06 auxprogs/utrrnaseq/evaluation/final-start-stop/final.start_stop.test.gff
13061 2022-09-23 19:06 auxprogs/utrrnaseq/evaluation/final-start-stop/final.start_stop.train.gff
368694 2022-09-23 19:06 auxprogs/utrrnaseq/evaluation/reference-utrs-for-eval.gff
2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/
1840 2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/README
2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/comparison-files/
163698 2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/comparison-files/comparison-human19-test-case-with-z.gff
56042 2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/comparison-files/comparison-human19-test-case-without-z.gff
2222 2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/comparison-files/comparison-intron-overlap-test-case.gff
678 2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/comparison-files/comparison-standard-test-case.gff
2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/intron-errors-test-set/
530 2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/intron-errors-test-set/test-introns.hints
0 2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/intron-errors-test-set/test-repeat.hints
359 2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/intron-errors-test-set/test-start-stop.gtf
1108 2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/intron-errors-test-set/test.fa
315 2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/intron-errors-test-set/test.wig
2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/intron-splice-sites-errors-test-set/
52 2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/intron-splice-sites-errors-test-set/test-introns.hints
0 2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/intron-splice-sites-errors-test-set/test-repeat.hints
359 2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/intron-splice-sites-errors-test-set/test-start-stop.gtf
1108 2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/intron-splice-sites-errors-test-set/test.fa
315 2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/intron-splice-sites-errors-test-set/test.wig
2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/minimal-coverage-test-set/
0 2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/minimal-coverage-test-set/test-introns.hints
0 2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/minimal-coverage-test-set/test-repeat.hints
359 2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/minimal-coverage-test-set/test-start-stop.gtf
1108 2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/minimal-coverage-test-set/test.fa
315 2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/minimal-coverage-test-set/test.wig
2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/overlap-introns-test-set/
677 2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/overlap-introns-test-set/test-introns-overlap.hints
0 2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/overlap-introns-test-set/test-repeat.hints
1087 2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/overlap-introns-test-set/test-start-stop.gtf
3326 2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/overlap-introns-test-set/test.fa
949 2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/overlap-introns-test-set/test.wig
2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/repeat-border-test-set/
0 2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/repeat-border-test-set/test-introns.hints
98 2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/repeat-border-test-set/test-repeat.hints
359 2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/repeat-border-test-set/test-start-stop.gtf
1108 2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/repeat-border-test-set/test.fa
315 2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/repeat-border-test-set/test.wig
2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/repeat-errors-test-set/
0 2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/repeat-errors-test-set/test-introns.hints
294 2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/repeat-errors-test-set/test-repeat.hints
359 2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/repeat-errors-test-set/test-start-stop.gtf
1108 2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/repeat-errors-test-set/test.fa
315 2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/repeat-errors-test-set/test.wig
2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/repeat-test-set/
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359 2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/repeat-test-set/test-start-stop.gtf
1108 2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/repeat-test-set/test.fa
315 2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/repeat-test-set/test.wig
2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/scaffold-errors-test-set/
0 2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/scaffold-errors-test-set/test-introns.hints
0 2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/scaffold-errors-test-set/test-repeat.hints
0 2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/scaffold-errors-test-set/test-start-stop.gtf
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2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/softmasking-border-test-set/
0 2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/softmasking-border-test-set/test-introns.hints
0 2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/softmasking-border-test-set/test-repeat.hints
359 2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/softmasking-border-test-set/test-start-stop.gtf
1108 2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/softmasking-border-test-set/test.fa
315 2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/softmasking-border-test-set/test.wig
2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/softmasking-test-set/
0 2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/softmasking-test-set/test-introns.hints
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359 2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/softmasking-test-set/test-start-stop.gtf
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2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/standard-test-set/
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2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/start-stop-errors-test-set/
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2022-09-23 19:06 auxprogs/utrrnaseq/for-test-cases/wiggle-errors-test-set/
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2022-09-23 19:06 auxprogs/utrrnaseq/input/
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2022-09-23 19:06 auxprogs/utrrnaseq/input/format-examples/
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2022-09-23 19:06 auxprogs/utrrnaseq/input/human-chr19/
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2022-09-23 19:06 auxprogs/utrrnaseq/input/human-chr19/trimmed-wig/
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2022-09-23 19:06 auxprogs/utrrnaseq/integration_test/
1440 2022-09-23 19:06 auxprogs/utrrnaseq/integration_test/test.sh
346 2022-09-23 19:06 auxprogs/utrrnaseq/output.example
2022-09-23 19:06 auxprogs/utrrnaseq/scripts/
806 2022-09-23 19:06 auxprogs/utrrnaseq/scripts/README
1785 2022-09-23 19:06 auxprogs/utrrnaseq/scripts/data2ucsc.sh
2357 2022-09-23 19:06 auxprogs/utrrnaseq/scripts/gff2lst.pl
9718 2022-09-23 19:06 auxprogs/utrrnaseq/scripts/test_utr_wrapper.pl
2022-09-23 19:06 auxprogs/utrrnaseq/src/
9203 2022-09-23 19:06 auxprogs/utrrnaseq/src/Compute_UTRs.cpp
2288 2022-09-23 19:06 auxprogs/utrrnaseq/src/Compute_UTRs.hpp
5970 2022-09-23 19:06 auxprogs/utrrnaseq/src/Coord_Transform.cpp
3717 2022-09-23 19:06 auxprogs/utrrnaseq/src/Coord_Transform.hpp
277 2022-09-23 19:06 auxprogs/utrrnaseq/src/Error.hpp
18526 2022-09-23 19:06 auxprogs/utrrnaseq/src/Genomic_Data.cpp
4932 2022-09-23 19:06 auxprogs/utrrnaseq/src/Genomic_Data.hpp
297 2022-09-23 19:06 auxprogs/utrrnaseq/src/Global.hpp
501 2022-09-23 19:06 auxprogs/utrrnaseq/src/README
3712 2022-09-23 19:06 auxprogs/utrrnaseq/src/Splice_Sites.cpp
2172 2022-09-23 19:06 auxprogs/utrrnaseq/src/Splice_Sites.hpp
1745 2022-09-23 19:06 auxprogs/utrrnaseq/src/Supporting_Methods.cpp
1071 2022-09-23 19:06 auxprogs/utrrnaseq/src/Supporting_Methods.hpp
30320 2022-09-23 19:06 auxprogs/utrrnaseq/src/Test.cpp
977 2022-09-23 19:06 auxprogs/utrrnaseq/src/Test.hpp
23039 2022-09-23 19:06 auxprogs/utrrnaseq/src/UTRs.cpp
5748 2022-09-23 19:06 auxprogs/utrrnaseq/src/UTRs.hpp
836 2022-09-23 19:06 auxprogs/utrrnaseq/src/flex_vec.hpp
12718 2022-09-23 19:06 auxprogs/utrrnaseq/src/main.cpp
2954 2022-09-23 19:06 common.mk
2022-09-23 19:06 config/
2022-09-23 19:06 config/cgp/
1672 2022-09-23 19:06 config/cgp/cgp_param_21features_accuracy_largerGrid.convDivCorrect.cfg
1173 2022-09-23 19:06 config/cgp/log_reg_parameters_arabidopsis.cfg
1546 2022-09-23 19:06 config/cgp/log_reg_parameters_default.cfg
2628 2022-09-23 19:06 config/cgp/log_reg_parameters_fly.cfg
1161 2022-09-23 19:06 config/cgp/log_reg_parameters_human.cfg
861 2022-09-23 19:06 config/cgp/log_reg_parameters_primates.cfg
937 2022-09-23 19:06 config/cgp/log_reg_parameters_s_aureus.cfg
2022-09-23 19:06 config/extrinsic/
6731 2022-09-23 19:06 config/extrinsic/extrinsic-cgp.cfg
2349 2022-09-23 19:06 config/extrinsic/extrinsic.E.XNT.cfg
2033 2022-09-23 19:06 config/extrinsic/extrinsic.E.cfg
2723 2022-09-23 19:06 config/extrinsic/extrinsic.M.RM.E.W.P.cfg
2552 2022-09-23 19:06 config/extrinsic/extrinsic.M.RM.E.W.cfg
2441 2022-09-23 19:06 config/extrinsic/extrinsic.M.RM.PB.cfg
2003 2022-09-23 19:06 config/extrinsic/extrinsic.ME.cfg
2574 2022-09-23 19:06 config/extrinsic/extrinsic.MEMS.cfg
2057 2022-09-23 19:06 config/extrinsic/extrinsic.MP.cfg
2809 2022-09-23 19:06 config/extrinsic/extrinsic.MPE.cfg
2350 2022-09-23 19:06 config/extrinsic/extrinsic.MT.cfg
9979 2022-09-23 19:06 config/extrinsic/extrinsic.cfg
2022-09-23 19:06 config/model/
3384 2022-09-23 19:06 config/model/constraints_shadow_partial.txt
4113 2022-09-23 19:06 config/model/constraints_shadow_partial_utr.txt
2400 2022-09-23 19:06 config/model/ovlp_len.pbl
2374 2022-09-23 19:06 config/model/ovlp_len_archaea.pbl
5594 2022-09-23 19:06 config/model/states_shadow.cfg
5672 2022-09-23 19:06 config/model/states_shadow_2igenic.cfg
866 2022-09-23 19:06 config/model/states_shadow_bacterium.cfg
856 2022-09-23 19:06 config/model/states_shadow_intronless.cfg
8509 2022-09-23 19:06 config/model/states_shadow_utr.cfg
10075 2022-09-23 19:06 config/model/states_shadow_utr_nc.cfg
3019 2022-09-23 19:06 config/model/states_singlestrand.cfg
3086 2022-09-23 19:06 config/model/states_singlestrand_2igenic.cfg
6884 2022-09-23 19:06 config/model/trans_shadow_atleastone.pbl
1353 2022-09-23 19:06 config/model/trans_shadow_bacterium.pbl
6435 2022-09-23 19:06 config/model/trans_shadow_complete.pbl
9818 2022-09-23 19:06 config/model/trans_shadow_complete_utr.pbl
6518 2022-09-23 19:06 config/model/trans_shadow_exactlyone.pbl
1197 2022-09-23 19:06 config/model/trans_shadow_intronless.pbl
9052 2022-09-23 19:06 config/model/trans_shadow_partial.pbl
14414 2022-09-23 19:06 config/model/trans_shadow_partial_utr.pbl
17332 2022-09-23 19:06 config/model/trans_shadow_partial_utr_nc.pbl
3690 2022-09-23 19:06 config/model/trans_singlestrand_atleastone.pbl
3416 2022-09-23 19:06 config/model/trans_singlestrand_complete.pbl
3487 2022-09-23 19:06 config/model/trans_singlestrand_exactlyone.pbl
4536 2022-09-23 19:06 config/model/trans_singlestrand_partial.pbl
2022-09-23 19:06 config/parameters/
1231 2022-09-23 19:06 config/parameters/AUG_CMDLN_PARAMETERS.md
49849 2022-09-23 19:06 config/parameters/aug_cmdln_parameters.json
2022-09-23 19:06 config/profile/
1752 2022-09-23 19:06 config/profile/blosum55.qij
1752 2022-09-23 19:06 config/profile/blosum62.qij
0 2022-09-23 19:06 config/profile/default.qij -> blosum62.qij
2022-09-23 19:06 config/species/
2022-09-23 19:06 config/species/Anopheles_gambiae/
265142 2022-09-23 19:06 config/species/Anopheles_gambiae/Anopheles_gambiae_exon_probs.pbl
32524 2022-09-23 19:06 config/species/Anopheles_gambiae/Anopheles_gambiae_igenic_probs.pbl
316261 2022-09-23 19:06 config/species/Anopheles_gambiae/Anopheles_gambiae_intron_probs.pbl
2057 2022-09-23 19:06 config/species/Anopheles_gambiae/Anopheles_gambiae_metapars.cfg
1125 2022-09-23 19:06 config/species/Anopheles_gambiae/Anopheles_gambiae_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/Anopheles_gambiae/Anopheles_gambiae_metapars.utr.cfg
7319 2022-09-23 19:06 config/species/Anopheles_gambiae/Anopheles_gambiae_parameters.cfg
810 2022-09-23 19:06 config/species/Anopheles_gambiae/Anopheles_gambiae_weightmatrix.txt
1734 2022-09-23 19:06 config/species/Anopheles_gambiae/README.txt
2022-09-23 19:06 config/species/Argopecten_irradians/
405541 2022-09-23 19:06 config/species/Argopecten_irradians/Argopecten_irradians_exon_probs.pbl
65224 2022-09-23 19:06 config/species/Argopecten_irradians/Argopecten_irradians_igenic_probs.pbl
226608 2022-09-23 19:06 config/species/Argopecten_irradians/Argopecten_irradians_intron_probs.pbl
2057 2022-09-23 19:06 config/species/Argopecten_irradians/Argopecten_irradians_metapars.cfg
1125 2022-09-23 19:06 config/species/Argopecten_irradians/Argopecten_irradians_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/Argopecten_irradians/Argopecten_irradians_metapars.utr.cfg
7356 2022-09-23 19:06 config/species/Argopecten_irradians/Argopecten_irradians_parameters.cfg
810 2022-09-23 19:06 config/species/Argopecten_irradians/Argopecten_irradians_weightmatrix.txt
1898 2022-09-23 19:06 config/species/Argopecten_irradians/README.txt
2022-09-23 19:06 config/species/Aurelia_aurita/
238812 2022-09-23 19:06 config/species/Aurelia_aurita/Aurelia_aurita_exon_probs.pbl
32585 2022-09-23 19:06 config/species/Aurelia_aurita/Aurelia_aurita_igenic_probs.pbl
306671 2022-09-23 19:06 config/species/Aurelia_aurita/Aurelia_aurita_intron_probs.pbl
2057 2022-09-23 19:06 config/species/Aurelia_aurita/Aurelia_aurita_metapars.cfg
1125 2022-09-23 19:06 config/species/Aurelia_aurita/Aurelia_aurita_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/Aurelia_aurita/Aurelia_aurita_metapars.utr.cfg
7293 2022-09-23 19:06 config/species/Aurelia_aurita/Aurelia_aurita_parameters.cfg
810 2022-09-23 19:06 config/species/Aurelia_aurita/Aurelia_aurita_weightmatrix.txt
1609 2022-09-23 19:06 config/species/Aurelia_aurita/README.txt
2022-09-23 19:06 config/species/Bathycoccus_prasinos/
265665 2022-09-23 19:06 config/species/Bathycoccus_prasinos/Bathycoccus_prasinos_exon_probs.pbl
32623 2022-09-23 19:06 config/species/Bathycoccus_prasinos/Bathycoccus_prasinos_igenic_probs.pbl
144397 2022-09-23 19:06 config/species/Bathycoccus_prasinos/Bathycoccus_prasinos_intron_probs.pbl
2057 2022-09-23 19:06 config/species/Bathycoccus_prasinos/Bathycoccus_prasinos_metapars.cfg
1125 2022-09-23 19:06 config/species/Bathycoccus_prasinos/Bathycoccus_prasinos_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/Bathycoccus_prasinos/Bathycoccus_prasinos_metapars.utr.cfg
7349 2022-09-23 19:06 config/species/Bathycoccus_prasinos/Bathycoccus_prasinos_parameters.cfg
810 2022-09-23 19:06 config/species/Bathycoccus_prasinos/Bathycoccus_prasinos_weightmatrix.txt
1555 2022-09-23 19:06 config/species/Bathycoccus_prasinos/README.txt
2022-09-23 19:06 config/species/Berviolum_minutum/
234294 2022-09-23 19:06 config/species/Berviolum_minutum/Berviolum_minutum_exon_probs.pbl
32567 2022-09-23 19:06 config/species/Berviolum_minutum/Berviolum_minutum_igenic_probs.pbl
92509 2022-09-23 19:06 config/species/Berviolum_minutum/Berviolum_minutum_intron_probs.pbl
2057 2022-09-23 19:06 config/species/Berviolum_minutum/Berviolum_minutum_metapars.cfg
1125 2022-09-23 19:06 config/species/Berviolum_minutum/Berviolum_minutum_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/Berviolum_minutum/Berviolum_minutum_metapars.utr.cfg
7316 2022-09-23 19:06 config/species/Berviolum_minutum/Berviolum_minutum_parameters.cfg
810 2022-09-23 19:06 config/species/Berviolum_minutum/Berviolum_minutum_weightmatrix.txt
1425 2022-09-23 19:06 config/species/Berviolum_minutum/README.txt
2022-09-23 19:06 config/species/Branchiostoma_floridae/
243068 2022-09-23 19:06 config/species/Branchiostoma_floridae/Branchiostoma_floridae_exon_probs.pbl
32477 2022-09-23 19:06 config/species/Branchiostoma_floridae/Branchiostoma_floridae_igenic_probs.pbl
140593 2022-09-23 19:06 config/species/Branchiostoma_floridae/Branchiostoma_floridae_intron_probs.pbl
2057 2022-09-23 19:06 config/species/Branchiostoma_floridae/Branchiostoma_floridae_metapars.cfg
1125 2022-09-23 19:06 config/species/Branchiostoma_floridae/Branchiostoma_floridae_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/Branchiostoma_floridae/Branchiostoma_floridae_metapars.utr.cfg
7380 2022-09-23 19:06 config/species/Branchiostoma_floridae/Branchiostoma_floridae_parameters.cfg
810 2022-09-23 19:06 config/species/Branchiostoma_floridae/Branchiostoma_floridae_weightmatrix.txt
1585 2022-09-23 19:06 config/species/Branchiostoma_floridae/README.txt
2022-09-23 19:06 config/species/Cassiopea_xamachana/
238402 2022-09-23 19:06 config/species/Cassiopea_xamachana/Cassiopea_xamachana_exon_probs.pbl
32609 2022-09-23 19:06 config/species/Cassiopea_xamachana/Cassiopea_xamachana_igenic_probs.pbl
142898 2022-09-23 19:06 config/species/Cassiopea_xamachana/Cassiopea_xamachana_intron_probs.pbl
2057 2022-09-23 19:06 config/species/Cassiopea_xamachana/Cassiopea_xamachana_metapars.cfg
1125 2022-09-23 19:06 config/species/Cassiopea_xamachana/Cassiopea_xamachana_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/Cassiopea_xamachana/Cassiopea_xamachana_metapars.utr.cfg
7342 2022-09-23 19:06 config/species/Cassiopea_xamachana/Cassiopea_xamachana_parameters.cfg
810 2022-09-23 19:06 config/species/Cassiopea_xamachana/Cassiopea_xamachana_weightmatrix.txt
2022-09-23 19:06 config/species/Chlamydomonas_eustigma/
231046 2022-09-23 19:06 config/species/Chlamydomonas_eustigma/Chlamydomonas_eustigma_exon_probs.pbl
32467 2022-09-23 19:06 config/species/Chlamydomonas_eustigma/Chlamydomonas_eustigma_igenic_probs.pbl
138295 2022-09-23 19:06 config/species/Chlamydomonas_eustigma/Chlamydomonas_eustigma_intron_probs.pbl
2057 2022-09-23 19:06 config/species/Chlamydomonas_eustigma/Chlamydomonas_eustigma_metapars.cfg
1125 2022-09-23 19:06 config/species/Chlamydomonas_eustigma/Chlamydomonas_eustigma_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/Chlamydomonas_eustigma/Chlamydomonas_eustigma_metapars.utr.cfg
7368 2022-09-23 19:06 config/species/Chlamydomonas_eustigma/Chlamydomonas_eustigma_parameters.cfg
810 2022-09-23 19:06 config/species/Chlamydomonas_eustigma/Chlamydomonas_eustigma_weightmatrix.txt
1618 2022-09-23 19:06 config/species/Chlamydomonas_eustigma/README.txt
2022-09-23 19:06 config/species/Chloropicon_primus/
221200 2022-09-23 19:06 config/species/Chloropicon_primus/Chloropicon_primus_exon_probs.pbl
32566 2022-09-23 19:06 config/species/Chloropicon_primus/Chloropicon_primus_igenic_probs.pbl
115526 2022-09-23 19:06 config/species/Chloropicon_primus/Chloropicon_primus_intron_probs.pbl
2057 2022-09-23 19:06 config/species/Chloropicon_primus/Chloropicon_primus_metapars.cfg
1125 2022-09-23 19:06 config/species/Chloropicon_primus/Chloropicon_primus_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/Chloropicon_primus/Chloropicon_primus_metapars.utr.cfg
7330 2022-09-23 19:06 config/species/Chloropicon_primus/Chloropicon_primus_parameters.cfg
810 2022-09-23 19:06 config/species/Chloropicon_primus/Chloropicon_primus_weightmatrix.txt
1543 2022-09-23 19:06 config/species/Chloropicon_primus/README.txt
2022-09-23 19:06 config/species/Chrysaora_chesapeakei/
257227 2022-09-23 19:06 config/species/Chrysaora_chesapeakei/Chrysaora_chesapeakei_exon_probs.pbl
32575 2022-09-23 19:06 config/species/Chrysaora_chesapeakei/Chrysaora_chesapeakei_igenic_probs.pbl
35055 2022-09-23 19:06 config/species/Chrysaora_chesapeakei/Chrysaora_chesapeakei_intron_probs.pbl
2057 2022-09-23 19:06 config/species/Chrysaora_chesapeakei/Chrysaora_chesapeakei_metapars.cfg
1125 2022-09-23 19:06 config/species/Chrysaora_chesapeakei/Chrysaora_chesapeakei_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/Chrysaora_chesapeakei/Chrysaora_chesapeakei_metapars.utr.cfg
7364 2022-09-23 19:06 config/species/Chrysaora_chesapeakei/Chrysaora_chesapeakei_parameters.cfg
810 2022-09-23 19:06 config/species/Chrysaora_chesapeakei/Chrysaora_chesapeakei_weightmatrix.txt
1856 2022-09-23 19:06 config/species/Chrysaora_chesapeakei/README.txt
2022-09-23 19:06 config/species/Conidiobolus_coronatus/
236566 2022-09-23 19:06 config/species/Conidiobolus_coronatus/Conidiobolus_coronatus_exon_probs.pbl
32796 2022-09-23 19:06 config/species/Conidiobolus_coronatus/Conidiobolus_coronatus_igenic_probs.pbl
78822 2022-09-23 19:06 config/species/Conidiobolus_coronatus/Conidiobolus_coronatus_intron_probs.pbl
2057 2022-09-23 19:06 config/species/Conidiobolus_coronatus/Conidiobolus_coronatus_metapars.cfg
1355 2022-09-23 19:06 config/species/Conidiobolus_coronatus/Conidiobolus_coronatus_metapars.utr.cfg
7373 2022-09-23 19:06 config/species/Conidiobolus_coronatus/Conidiobolus_coronatus_parameters.cfg
80732 2022-09-23 19:06 config/species/Conidiobolus_coronatus/Conidiobolus_coronatus_utr_probs.pbl
810 2022-09-23 19:06 config/species/Conidiobolus_coronatus/Conidiobolus_coronatus_weightmatrix.txt
2022-09-23 19:06 config/species/Cryptosporidium_hominis/
264705 2022-09-23 19:06 config/species/Cryptosporidium_hominis/Cryptosporidium_hominis_exon_probs.pbl
32755 2022-09-23 19:06 config/species/Cryptosporidium_hominis/Cryptosporidium_hominis_igenic_probs.pbl
126356 2022-09-23 19:06 config/species/Cryptosporidium_hominis/Cryptosporidium_hominis_intron_probs.pbl
2057 2022-09-23 19:06 config/species/Cryptosporidium_hominis/Cryptosporidium_hominis_metapars.cfg
1125 2022-09-23 19:06 config/species/Cryptosporidium_hominis/Cryptosporidium_hominis_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/Cryptosporidium_hominis/Cryptosporidium_hominis_metapars.utr.cfg
7387 2022-09-23 19:06 config/species/Cryptosporidium_hominis/Cryptosporidium_hominis_parameters.cfg
810 2022-09-23 19:06 config/species/Cryptosporidium_hominis/Cryptosporidium_hominis_weightmatrix.txt
1549 2022-09-23 19:06 config/species/Cryptosporidium_hominis/README.txt
2022-09-23 19:06 config/species/Cyclotella_cryptica/
233287 2022-09-23 19:06 config/species/Cyclotella_cryptica/Cyclotella_cryptica_exon_probs.pbl
32490 2022-09-23 19:06 config/species/Cyclotella_cryptica/Cyclotella_cryptica_igenic_probs.pbl
91245 2022-09-23 19:06 config/species/Cyclotella_cryptica/Cyclotella_cryptica_intron_probs.pbl
2057 2022-09-23 19:06 config/species/Cyclotella_cryptica/Cyclotella_cryptica_metapars.cfg
1125 2022-09-23 19:06 config/species/Cyclotella_cryptica/Cyclotella_cryptica_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/Cyclotella_cryptica/Cyclotella_cryptica_metapars.utr.cfg
7347 2022-09-23 19:06 config/species/Cyclotella_cryptica/Cyclotella_cryptica_parameters.cfg
810 2022-09-23 19:06 config/species/Cyclotella_cryptica/Cyclotella_cryptica_weightmatrix.txt
1629 2022-09-23 19:06 config/species/Cyclotella_cryptica/README.txt
2022-09-23 19:06 config/species/Dermasterias_imbricata/
232240 2022-09-23 19:06 config/species/Dermasterias_imbricata/Dermasterias_imbricata_exon_probs.pbl
32525 2022-09-23 19:06 config/species/Dermasterias_imbricata/Dermasterias_imbricata_igenic_probs.pbl
374859 2022-09-23 19:06 config/species/Dermasterias_imbricata/Dermasterias_imbricata_intron_probs.pbl
2057 2022-09-23 19:06 config/species/Dermasterias_imbricata/Dermasterias_imbricata_metapars.cfg
1125 2022-09-23 19:06 config/species/Dermasterias_imbricata/Dermasterias_imbricata_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/Dermasterias_imbricata/Dermasterias_imbricata_metapars.utr.cfg
7371 2022-09-23 19:06 config/species/Dermasterias_imbricata/Dermasterias_imbricata_parameters.cfg
810 2022-09-23 19:06 config/species/Dermasterias_imbricata/Dermasterias_imbricata_weightmatrix.txt
1603 2022-09-23 19:06 config/species/Dermasterias_imbricata/README.txt
2022-09-23 19:06 config/species/Dunaliella_salina/
242197 2022-09-23 19:06 config/species/Dunaliella_salina/Dunaliella_salina_exon_probs.pbl
32470 2022-09-23 19:06 config/species/Dunaliella_salina/Dunaliella_salina_igenic_probs.pbl
355651 2022-09-23 19:06 config/species/Dunaliella_salina/Dunaliella_salina_intron_probs.pbl
2057 2022-09-23 19:06 config/species/Dunaliella_salina/Dunaliella_salina_metapars.cfg
1125 2022-09-23 19:06 config/species/Dunaliella_salina/Dunaliella_salina_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/Dunaliella_salina/Dunaliella_salina_metapars.utr.cfg
7319 2022-09-23 19:06 config/species/Dunaliella_salina/Dunaliella_salina_parameters.cfg
810 2022-09-23 19:06 config/species/Dunaliella_salina/Dunaliella_salina_weightmatrix.txt
1575 2022-09-23 19:06 config/species/Dunaliella_salina/README.txt
2022-09-23 19:06 config/species/E_coli_K12/
901153 2022-09-23 19:06 config/species/E_coli_K12/E_coli_K12_exon_probs.pbl
96171 2022-09-23 19:06 config/species/E_coli_K12/E_coli_K12_igenic_probs.pbl
1523 2022-09-23 19:06 config/species/E_coli_K12/E_coli_K12_metapars.cfg
1355 2022-09-23 19:06 config/species/E_coli_K12/E_coli_K12_metapars.utr.cfg
2400 2022-09-23 19:06 config/species/E_coli_K12/E_coli_K12_ovlp_len.pbl
7545 2022-09-23 19:06 config/species/E_coli_K12/E_coli_K12_parameters.cfg
1401 2022-09-23 19:06 config/species/E_coli_K12/E_coli_K12_trans_shadow_bacterium.pbl
810 2022-09-23 19:06 config/species/E_coli_K12/E_coli_K12_weightmatrix.txt
2022-09-23 19:06 config/species/Ectocarpus_siliculosus/
232596 2022-09-23 19:06 config/species/Ectocarpus_siliculosus/Ectocarpus_siliculosus_exon_probs.pbl
32455 2022-09-23 19:06 config/species/Ectocarpus_siliculosus/Ectocarpus_siliculosus_igenic_probs.pbl
171948 2022-09-23 19:06 config/species/Ectocarpus_siliculosus/Ectocarpus_siliculosus_intron_probs.pbl
2057 2022-09-23 19:06 config/species/Ectocarpus_siliculosus/Ectocarpus_siliculosus_metapars.cfg
1125 2022-09-23 19:06 config/species/Ectocarpus_siliculosus/Ectocarpus_siliculosus_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/Ectocarpus_siliculosus/Ectocarpus_siliculosus_metapars.utr.cfg
7377 2022-09-23 19:06 config/species/Ectocarpus_siliculosus/Ectocarpus_siliculosus_parameters.cfg
810 2022-09-23 19:06 config/species/Ectocarpus_siliculosus/Ectocarpus_siliculosus_weightmatrix.txt
1561 2022-09-23 19:06 config/species/Ectocarpus_siliculosus/README.txt
2022-09-23 19:06 config/species/Encephalitozoon_cuniculi/
211950 2022-09-23 19:06 config/species/Encephalitozoon_cuniculi/Encephalitozoon_cuniculi_exon_probs.pbl
32454 2022-09-23 19:06 config/species/Encephalitozoon_cuniculi/Encephalitozoon_cuniculi_igenic_probs.pbl
33659 2022-09-23 19:06 config/species/Encephalitozoon_cuniculi/Encephalitozoon_cuniculi_intron_probs.pbl
2057 2022-09-23 19:06 config/species/Encephalitozoon_cuniculi/Encephalitozoon_cuniculi_metapars.cfg
1125 2022-09-23 19:06 config/species/Encephalitozoon_cuniculi/Encephalitozoon_cuniculi_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/Encephalitozoon_cuniculi/Encephalitozoon_cuniculi_metapars.utr.cfg
7395 2022-09-23 19:06 config/species/Encephalitozoon_cuniculi/Encephalitozoon_cuniculi_parameters.cfg
810 2022-09-23 19:06 config/species/Encephalitozoon_cuniculi/Encephalitozoon_cuniculi_weightmatrix.txt
1660 2022-09-23 19:06 config/species/Encephalitozoon_cuniculi/README.txt
2022-09-23 19:06 config/species/Fistulifera_solaris/
255555 2022-09-23 19:06 config/species/Fistulifera_solaris/Fistulifera_solaris_exon_probs.pbl
32521 2022-09-23 19:06 config/species/Fistulifera_solaris/Fistulifera_solaris_igenic_probs.pbl
143803 2022-09-23 19:06 config/species/Fistulifera_solaris/Fistulifera_solaris_intron_probs.pbl
2057 2022-09-23 19:06 config/species/Fistulifera_solaris/Fistulifera_solaris_metapars.cfg
1125 2022-09-23 19:06 config/species/Fistulifera_solaris/Fistulifera_solaris_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/Fistulifera_solaris/Fistulifera_solaris_metapars.utr.cfg
7340 2022-09-23 19:06 config/species/Fistulifera_solaris/Fistulifera_solaris_parameters.cfg
810 2022-09-23 19:06 config/species/Fistulifera_solaris/Fistulifera_solaris_weightmatrix.txt
1577 2022-09-23 19:06 config/species/Fistulifera_solaris/README.txt
2022-09-23 19:06 config/species/Fragilariopsis_cylindrus_CCMP1102/
223001 2022-09-23 19:06 config/species/Fragilariopsis_cylindrus_CCMP1102/Fragilariopsis_cylindrus_CCMP1102_exon_probs.pbl
32560 2022-09-23 19:06 config/species/Fragilariopsis_cylindrus_CCMP1102/Fragilariopsis_cylindrus_CCMP1102_igenic_probs.pbl
365874 2022-09-23 19:06 config/species/Fragilariopsis_cylindrus_CCMP1102/Fragilariopsis_cylindrus_CCMP1102_intron_probs.pbl
2057 2022-09-23 19:06 config/species/Fragilariopsis_cylindrus_CCMP1102/Fragilariopsis_cylindrus_CCMP1102_metapars.cfg
1125 2022-09-23 19:06 config/species/Fragilariopsis_cylindrus_CCMP1102/Fragilariopsis_cylindrus_CCMP1102_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/Fragilariopsis_cylindrus_CCMP1102/Fragilariopsis_cylindrus_CCMP1102_metapars.utr.cfg
7493 2022-09-23 19:06 config/species/Fragilariopsis_cylindrus_CCMP1102/Fragilariopsis_cylindrus_CCMP1102_parameters.cfg
810 2022-09-23 19:06 config/species/Fragilariopsis_cylindrus_CCMP1102/Fragilariopsis_cylindrus_CCMP1102_weightmatrix.txt
1636 2022-09-23 19:06 config/species/Fragilariopsis_cylindrus_CCMP1102/README.txt
2022-09-23 19:06 config/species/Gonapodya_prolifera/
235822 2022-09-23 19:06 config/species/Gonapodya_prolifera/Gonapodya_prolifera_exon_probs.pbl
32427 2022-09-23 19:06 config/species/Gonapodya_prolifera/Gonapodya_prolifera_igenic_probs.pbl
161264 2022-09-23 19:06 config/species/Gonapodya_prolifera/Gonapodya_prolifera_intron_probs.pbl
2057 2022-09-23 19:06 config/species/Gonapodya_prolifera/Gonapodya_prolifera_metapars.cfg
1125 2022-09-23 19:06 config/species/Gonapodya_prolifera/Gonapodya_prolifera_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/Gonapodya_prolifera/Gonapodya_prolifera_metapars.utr.cfg
7342 2022-09-23 19:06 config/species/Gonapodya_prolifera/Gonapodya_prolifera_parameters.cfg
810 2022-09-23 19:06 config/species/Gonapodya_prolifera/Gonapodya_prolifera_weightmatrix.txt
1558 2022-09-23 19:06 config/species/Gonapodya_prolifera/README.txt
2022-09-23 19:06 config/species/Hydra_vulgaris/
912381 2022-09-23 19:06 config/species/Hydra_vulgaris/Hydra_vulgaris_exon_probs.pbl
163626 2022-09-23 19:06 config/species/Hydra_vulgaris/Hydra_vulgaris_igenic_probs.pbl
248148 2022-09-23 19:06 config/species/Hydra_vulgaris/Hydra_vulgaris_intron_probs.pbl
2057 2022-09-23 19:06 config/species/Hydra_vulgaris/Hydra_vulgaris_metapars.cfg
1125 2022-09-23 19:06 config/species/Hydra_vulgaris/Hydra_vulgaris_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/Hydra_vulgaris/Hydra_vulgaris_metapars.utr.cfg
7291 2022-09-23 19:06 config/species/Hydra_vulgaris/Hydra_vulgaris_parameters.cfg
810 2022-09-23 19:06 config/species/Hydra_vulgaris/Hydra_vulgaris_weightmatrix.txt
1609 2022-09-23 19:06 config/species/Hydra_vulgaris/README.txt
2022-09-23 19:06 config/species/Leptasterias_sp/
229472 2022-09-23 19:06 config/species/Leptasterias_sp/Leptasterias_sp_exon_probs.pbl
32573 2022-09-23 19:06 config/species/Leptasterias_sp/Leptasterias_sp_igenic_probs.pbl
354082 2022-09-23 19:06 config/species/Leptasterias_sp/Leptasterias_sp_intron_probs.pbl
2057 2022-09-23 19:06 config/species/Leptasterias_sp/Leptasterias_sp_metapars.cfg
1125 2022-09-23 19:06 config/species/Leptasterias_sp/Leptasterias_sp_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/Leptasterias_sp/Leptasterias_sp_metapars.utr.cfg
7299 2022-09-23 19:06 config/species/Leptasterias_sp/Leptasterias_sp_parameters.cfg
810 2022-09-23 19:06 config/species/Leptasterias_sp/Leptasterias_sp_weightmatrix.txt
1566 2022-09-23 19:06 config/species/Leptasterias_sp/README.txt
2022-09-23 19:06 config/species/Loa_loa/
245415 2022-09-23 19:06 config/species/Loa_loa/Loa_loa_exon_probs.pbl
32597 2022-09-23 19:06 config/species/Loa_loa/Loa_loa_igenic_probs.pbl
145947 2022-09-23 19:06 config/species/Loa_loa/Loa_loa_intron_probs.pbl
2057 2022-09-23 19:06 config/species/Loa_loa/Loa_loa_metapars.cfg
1125 2022-09-23 19:06 config/species/Loa_loa/Loa_loa_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/Loa_loa/Loa_loa_metapars.utr.cfg
7213 2022-09-23 19:06 config/species/Loa_loa/Loa_loa_parameters.cfg
810 2022-09-23 19:06 config/species/Loa_loa/Loa_loa_weightmatrix.txt
1553 2022-09-23 19:06 config/species/Loa_loa/README.txt
2022-09-23 19:06 config/species/Micromonas_commoda/
236722 2022-09-23 19:06 config/species/Micromonas_commoda/Micromonas_commoda_exon_probs.pbl
32519 2022-09-23 19:06 config/species/Micromonas_commoda/Micromonas_commoda_igenic_probs.pbl
140881 2022-09-23 19:06 config/species/Micromonas_commoda/Micromonas_commoda_intron_probs.pbl
2057 2022-09-23 19:06 config/species/Micromonas_commoda/Micromonas_commoda_metapars.cfg
1125 2022-09-23 19:06 config/species/Micromonas_commoda/Micromonas_commoda_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/Micromonas_commoda/Micromonas_commoda_metapars.utr.cfg
7329 2022-09-23 19:06 config/species/Micromonas_commoda/Micromonas_commoda_parameters.cfg
810 2022-09-23 19:06 config/species/Micromonas_commoda/Micromonas_commoda_weightmatrix.txt
1545 2022-09-23 19:06 config/species/Micromonas_commoda/README.txt
2022-09-23 19:06 config/species/Micromonas_pusilla/
226856 2022-09-23 19:06 config/species/Micromonas_pusilla/Micromonas_pusilla_exon_probs.pbl
32661 2022-09-23 19:06 config/species/Micromonas_pusilla/Micromonas_pusilla_igenic_probs.pbl
156465 2022-09-23 19:06 config/species/Micromonas_pusilla/Micromonas_pusilla_intron_probs.pbl
2057 2022-09-23 19:06 config/species/Micromonas_pusilla/Micromonas_pusilla_metapars.cfg
1125 2022-09-23 19:06 config/species/Micromonas_pusilla/Micromonas_pusilla_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/Micromonas_pusilla/Micromonas_pusilla_metapars.utr.cfg
7330 2022-09-23 19:06 config/species/Micromonas_pusilla/Micromonas_pusilla_parameters.cfg
810 2022-09-23 19:06 config/species/Micromonas_pusilla/Micromonas_pusilla_weightmatrix.txt
1569 2022-09-23 19:06 config/species/Micromonas_pusilla/README.txt
2022-09-23 19:06 config/species/Monoraphidium_neglectum/
240735 2022-09-23 19:06 config/species/Monoraphidium_neglectum/Monoraphidium_neglectum_exon_probs.pbl
32526 2022-09-23 19:06 config/species/Monoraphidium_neglectum/Monoraphidium_neglectum_igenic_probs.pbl
144073 2022-09-23 19:06 config/species/Monoraphidium_neglectum/Monoraphidium_neglectum_intron_probs.pbl
2057 2022-09-23 19:06 config/species/Monoraphidium_neglectum/Monoraphidium_neglectum_metapars.cfg
1125 2022-09-23 19:06 config/species/Monoraphidium_neglectum/Monoraphidium_neglectum_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/Monoraphidium_neglectum/Monoraphidium_neglectum_metapars.utr.cfg
7381 2022-09-23 19:06 config/species/Monoraphidium_neglectum/Monoraphidium_neglectum_parameters.cfg
810 2022-09-23 19:06 config/species/Monoraphidium_neglectum/Monoraphidium_neglectum_weightmatrix.txt
1570 2022-09-23 19:06 config/species/Monoraphidium_neglectum/README.txt
2022-09-23 19:06 config/species/Monosiga_brevicollis/
228830 2022-09-23 19:06 config/species/Monosiga_brevicollis/Monosiga_brevicollis_exon_probs.pbl
32523 2022-09-23 19:06 config/species/Monosiga_brevicollis/Monosiga_brevicollis_igenic_probs.pbl
53810 2022-09-23 19:06 config/species/Monosiga_brevicollis/Monosiga_brevicollis_intron_probs.pbl
2057 2022-09-23 19:06 config/species/Monosiga_brevicollis/Monosiga_brevicollis_metapars.cfg
1125 2022-09-23 19:06 config/species/Monosiga_brevicollis/Monosiga_brevicollis_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/Monosiga_brevicollis/Monosiga_brevicollis_metapars.utr.cfg
7353 2022-09-23 19:06 config/species/Monosiga_brevicollis/Monosiga_brevicollis_parameters.cfg
810 2022-09-23 19:06 config/species/Monosiga_brevicollis/Monosiga_brevicollis_weightmatrix.txt
1479 2022-09-23 19:06 config/species/Monosiga_brevicollis/README.txt
2022-09-23 19:06 config/species/Naegleria_gruberi/
261797 2022-09-23 19:06 config/species/Naegleria_gruberi/Naegleria_gruberi_exon_probs.pbl
32652 2022-09-23 19:06 config/species/Naegleria_gruberi/Naegleria_gruberi_igenic_probs.pbl
135943 2022-09-23 19:06 config/species/Naegleria_gruberi/Naegleria_gruberi_intron_probs.pbl
2057 2022-09-23 19:06 config/species/Naegleria_gruberi/Naegleria_gruberi_metapars.cfg
1125 2022-09-23 19:06 config/species/Naegleria_gruberi/Naegleria_gruberi_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/Naegleria_gruberi/Naegleria_gruberi_metapars.utr.cfg
7321 2022-09-23 19:06 config/species/Naegleria_gruberi/Naegleria_gruberi_parameters.cfg
810 2022-09-23 19:06 config/species/Naegleria_gruberi/Naegleria_gruberi_weightmatrix.txt
1492 2022-09-23 19:06 config/species/Naegleria_gruberi/README.txt
2022-09-23 19:06 config/species/Nemopilema_nomurai/
252774 2022-09-23 19:06 config/species/Nemopilema_nomurai/Nemopilema_nomurai_exon_probs.pbl
32548 2022-09-23 19:06 config/species/Nemopilema_nomurai/Nemopilema_nomurai_igenic_probs.pbl
147283 2022-09-23 19:06 config/species/Nemopilema_nomurai/Nemopilema_nomurai_intron_probs.pbl
2057 2022-09-23 19:06 config/species/Nemopilema_nomurai/Nemopilema_nomurai_metapars.cfg
1125 2022-09-23 19:06 config/species/Nemopilema_nomurai/Nemopilema_nomurai_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/Nemopilema_nomurai/Nemopilema_nomurai_metapars.utr.cfg
7330 2022-09-23 19:06 config/species/Nemopilema_nomurai/Nemopilema_nomurai_parameters.cfg
810 2022-09-23 19:06 config/species/Nemopilema_nomurai/Nemopilema_nomurai_weightmatrix.txt
1621 2022-09-23 19:06 config/species/Nemopilema_nomurai/README.txt
2022-09-23 19:06 config/species/Notospermus_geniculatus/
237967 2022-09-23 19:06 config/species/Notospermus_geniculatus/Notospermus_geniculatus_exon_probs.pbl
32491 2022-09-23 19:06 config/species/Notospermus_geniculatus/Notospermus_geniculatus_igenic_probs.pbl
345738 2022-09-23 19:06 config/species/Notospermus_geniculatus/Notospermus_geniculatus_intron_probs.pbl
2057 2022-09-23 19:06 config/species/Notospermus_geniculatus/Notospermus_geniculatus_metapars.cfg
1125 2022-09-23 19:06 config/species/Notospermus_geniculatus/Notospermus_geniculatus_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/Notospermus_geniculatus/Notospermus_geniculatus_metapars.utr.cfg
7375 2022-09-23 19:06 config/species/Notospermus_geniculatus/Notospermus_geniculatus_parameters.cfg
810 2022-09-23 19:06 config/species/Notospermus_geniculatus/Notospermus_geniculatus_weightmatrix.txt
902 2022-09-23 19:06 config/species/Notospermus_geniculatus/README.txt
2022-09-23 19:06 config/species/Ostreococcus_sp_lucimarinus/
233304 2022-09-23 19:06 config/species/Ostreococcus_sp_lucimarinus/Ostreococcus_sp_lucimarinus_exon_probs.pbl
32747 2022-09-23 19:06 config/species/Ostreococcus_sp_lucimarinus/Ostreococcus_sp_lucimarinus_igenic_probs.pbl
139089 2022-09-23 19:06 config/species/Ostreococcus_sp_lucimarinus/Ostreococcus_sp_lucimarinus_intron_probs.pbl
2057 2022-09-23 19:06 config/species/Ostreococcus_sp_lucimarinus/Ostreococcus_sp_lucimarinus_metapars.cfg
1125 2022-09-23 19:06 config/species/Ostreococcus_sp_lucimarinus/Ostreococcus_sp_lucimarinus_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/Ostreococcus_sp_lucimarinus/Ostreococcus_sp_lucimarinus_metapars.utr.cfg
7434 2022-09-23 19:06 config/species/Ostreococcus_sp_lucimarinus/Ostreococcus_sp_lucimarinus_parameters.cfg
810 2022-09-23 19:06 config/species/Ostreococcus_sp_lucimarinus/Ostreococcus_sp_lucimarinus_weightmatrix.txt
1602 2022-09-23 19:06 config/species/Ostreococcus_sp_lucimarinus/README.txt
2022-09-23 19:06 config/species/Ostreococcus_tauri/
261241 2022-09-23 19:06 config/species/Ostreococcus_tauri/Ostreococcus_tauri_exon_probs.pbl
32668 2022-09-23 19:06 config/species/Ostreococcus_tauri/Ostreococcus_tauri_igenic_probs.pbl
309099 2022-09-23 19:06 config/species/Ostreococcus_tauri/Ostreococcus_tauri_intron_probs.pbl
2057 2022-09-23 19:06 config/species/Ostreococcus_tauri/Ostreococcus_tauri_metapars.cfg
1125 2022-09-23 19:06 config/species/Ostreococcus_tauri/Ostreococcus_tauri_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/Ostreococcus_tauri/Ostreococcus_tauri_metapars.utr.cfg
7331 2022-09-23 19:06 config/species/Ostreococcus_tauri/Ostreococcus_tauri_parameters.cfg
810 2022-09-23 19:06 config/species/Ostreococcus_tauri/Ostreococcus_tauri_weightmatrix.txt
1556 2022-09-23 19:06 config/species/Ostreococcus_tauri/README.txt
2022-09-23 19:06 config/species/Paramecium_tetraurelia/
234471 2022-09-23 19:06 config/species/Paramecium_tetraurelia/Paramecium_tetraurelia_exon_probs.pbl
32716 2022-09-23 19:06 config/species/Paramecium_tetraurelia/Paramecium_tetraurelia_igenic_probs.pbl
37558 2022-09-23 19:06 config/species/Paramecium_tetraurelia/Paramecium_tetraurelia_intron_probs.pbl
2057 2022-09-23 19:06 config/species/Paramecium_tetraurelia/Paramecium_tetraurelia_metapars.cfg
1125 2022-09-23 19:06 config/species/Paramecium_tetraurelia/Paramecium_tetraurelia_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/Paramecium_tetraurelia/Paramecium_tetraurelia_metapars.utr.cfg
7377 2022-09-23 19:06 config/species/Paramecium_tetraurelia/Paramecium_tetraurelia_parameters.cfg
810 2022-09-23 19:06 config/species/Paramecium_tetraurelia/Paramecium_tetraurelia_weightmatrix.txt
1600 2022-09-23 19:06 config/species/Paramecium_tetraurelia/README.txt
2022-09-23 19:06 config/species/Pediculus_humanus/
238746 2022-09-23 19:06 config/species/Pediculus_humanus/Pediculus_humanus_exon_probs.pbl
32888 2022-09-23 19:06 config/species/Pediculus_humanus/Pediculus_humanus_igenic_probs.pbl
144406 2022-09-23 19:06 config/species/Pediculus_humanus/Pediculus_humanus_intron_probs.pbl
2057 2022-09-23 19:06 config/species/Pediculus_humanus/Pediculus_humanus_metapars.cfg
1125 2022-09-23 19:06 config/species/Pediculus_humanus/Pediculus_humanus_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/Pediculus_humanus/Pediculus_humanus_metapars.utr.cfg
7324 2022-09-23 19:06 config/species/Pediculus_humanus/Pediculus_humanus_parameters.cfg
810 2022-09-23 19:06 config/species/Pediculus_humanus/Pediculus_humanus_weightmatrix.txt
1688 2022-09-23 19:06 config/species/Pediculus_humanus/README.txt
2022-09-23 19:06 config/species/Perkinsus_marinus/
770362 2022-09-23 19:06 config/species/Perkinsus_marinus/Perkinsus_marinus_exon_probs.pbl
129774 2022-09-23 19:06 config/species/Perkinsus_marinus/Perkinsus_marinus_igenic_probs.pbl
527825 2022-09-23 19:06 config/species/Perkinsus_marinus/Perkinsus_marinus_intron_probs.pbl
2057 2022-09-23 19:06 config/species/Perkinsus_marinus/Perkinsus_marinus_metapars.cfg
1125 2022-09-23 19:06 config/species/Perkinsus_marinus/Perkinsus_marinus_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/Perkinsus_marinus/Perkinsus_marinus_metapars.utr.cfg
7323 2022-09-23 19:06 config/species/Perkinsus_marinus/Perkinsus_marinus_parameters.cfg
810 2022-09-23 19:06 config/species/Perkinsus_marinus/Perkinsus_marinus_weightmatrix.txt
1507 2022-09-23 19:06 config/species/Perkinsus_marinus/README.txt
2022-09-23 19:06 config/species/Phaeodactylum_tricornutum/
224480 2022-09-23 19:06 config/species/Phaeodactylum_tricornutum/Phaeodactylum_tricornutum_exon_probs.pbl
32502 2022-09-23 19:06 config/species/Phaeodactylum_tricornutum/Phaeodactylum_tricornutum_igenic_probs.pbl
87211 2022-09-23 19:06 config/species/Phaeodactylum_tricornutum/Phaeodactylum_tricornutum_intron_probs.pbl
2057 2022-09-23 19:06 config/species/Phaeodactylum_tricornutum/Phaeodactylum_tricornutum_metapars.cfg
1125 2022-09-23 19:06 config/species/Phaeodactylum_tricornutum/Phaeodactylum_tricornutum_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/Phaeodactylum_tricornutum/Phaeodactylum_tricornutum_metapars.utr.cfg
7405 2022-09-23 19:06 config/species/Phaeodactylum_tricornutum/Phaeodactylum_tricornutum_parameters.cfg
810 2022-09-23 19:06 config/species/Phaeodactylum_tricornutum/Phaeodactylum_tricornutum_weightmatrix.txt
1607 2022-09-23 19:06 config/species/Phaeodactylum_tricornutum/README.txt
2022-09-23 19:06 config/species/Physcomitrium_patens/
232950 2022-09-23 19:06 config/species/Physcomitrium_patens/Physcomitrium_patens_exon_probs.pbl
32490 2022-09-23 19:06 config/species/Physcomitrium_patens/Physcomitrium_patens_igenic_probs.pbl
138358 2022-09-23 19:06 config/species/Physcomitrium_patens/Physcomitrium_patens_intron_probs.pbl
2057 2022-09-23 19:06 config/species/Physcomitrium_patens/Physcomitrium_patens_metapars.cfg
1125 2022-09-23 19:06 config/species/Physcomitrium_patens/Physcomitrium_patens_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/Physcomitrium_patens/Physcomitrium_patens_metapars.utr.cfg
7351 2022-09-23 19:06 config/species/Physcomitrium_patens/Physcomitrium_patens_parameters.cfg
810 2022-09-23 19:06 config/species/Physcomitrium_patens/Physcomitrium_patens_weightmatrix.txt
1587 2022-09-23 19:06 config/species/Physcomitrium_patens/README.txt
2022-09-23 19:06 config/species/Populus_trichocarpa/
468885 2022-09-23 19:06 config/species/Populus_trichocarpa/Populus_trichocarpa_exon_probs.pbl
65276 2022-09-23 19:06 config/species/Populus_trichocarpa/Populus_trichocarpa_igenic_probs.pbl
412397 2022-09-23 19:06 config/species/Populus_trichocarpa/Populus_trichocarpa_intron_probs.pbl
2057 2022-09-23 19:06 config/species/Populus_trichocarpa/Populus_trichocarpa_metapars.cfg
1125 2022-09-23 19:06 config/species/Populus_trichocarpa/Populus_trichocarpa_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/Populus_trichocarpa/Populus_trichocarpa_metapars.utr.cfg
7507 2022-09-23 19:06 config/species/Populus_trichocarpa/Populus_trichocarpa_parameters.cfg
7633 2022-09-23 19:06 config/species/Populus_trichocarpa/Populus_trichocarpa_parameters.cfg~
810 2022-09-23 19:06 config/species/Populus_trichocarpa/Populus_trichocarpa_weightmatrix.txt
2022-09-23 19:06 config/species/Pseudo-nitzschia_multistriata/
579332 2022-09-23 19:06 config/species/Pseudo-nitzschia_multistriata/Pseudo-nitzschia_multistriata_exon_probs.pbl
97645 2022-09-23 19:06 config/species/Pseudo-nitzschia_multistriata/Pseudo-nitzschia_multistriata_igenic_probs.pbl
162723 2022-09-23 19:06 config/species/Pseudo-nitzschia_multistriata/Pseudo-nitzschia_multistriata_intron_probs.pbl
2057 2022-09-23 19:06 config/species/Pseudo-nitzschia_multistriata/Pseudo-nitzschia_multistriata_metapars.cfg
1125 2022-09-23 19:06 config/species/Pseudo-nitzschia_multistriata/Pseudo-nitzschia_multistriata_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/Pseudo-nitzschia_multistriata/Pseudo-nitzschia_multistriata_metapars.utr.cfg
7454 2022-09-23 19:06 config/species/Pseudo-nitzschia_multistriata/Pseudo-nitzschia_multistriata_parameters.cfg
810 2022-09-23 19:06 config/species/Pseudo-nitzschia_multistriata/Pseudo-nitzschia_multistriata_weightmatrix.txt
1626 2022-09-23 19:06 config/species/Pseudo-nitzschia_multistriata/README.txt
2022-09-23 19:06 config/species/Ptychodera_flava/
225175 2022-09-23 19:06 config/species/Ptychodera_flava/Ptychodera_flava_exon_probs.pbl
32568 2022-09-23 19:06 config/species/Ptychodera_flava/Ptychodera_flava_igenic_probs.pbl
139397 2022-09-23 19:06 config/species/Ptychodera_flava/Ptychodera_flava_intron_probs.pbl
2057 2022-09-23 19:06 config/species/Ptychodera_flava/Ptychodera_flava_metapars.cfg
1125 2022-09-23 19:06 config/species/Ptychodera_flava/Ptychodera_flava_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/Ptychodera_flava/Ptychodera_flava_metapars.utr.cfg
7311 2022-09-23 19:06 config/species/Ptychodera_flava/Ptychodera_flava_parameters.cfg
810 2022-09-23 19:06 config/species/Ptychodera_flava/Ptychodera_flava_weightmatrix.txt
1868 2022-09-23 19:06 config/species/Ptychodera_flava/README.txt
2022-09-23 19:06 config/species/Pycnopodia_helianthoides/
238716 2022-09-23 19:06 config/species/Pycnopodia_helianthoides/Pycnopodia_helianthoides_exon_probs.pbl
32539 2022-09-23 19:06 config/species/Pycnopodia_helianthoides/Pycnopodia_helianthoides_igenic_probs.pbl
345143 2022-09-23 19:06 config/species/Pycnopodia_helianthoides/Pycnopodia_helianthoides_intron_probs.pbl
2057 2022-09-23 19:06 config/species/Pycnopodia_helianthoides/Pycnopodia_helianthoides_metapars.cfg
1125 2022-09-23 19:06 config/species/Pycnopodia_helianthoides/Pycnopodia_helianthoides_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/Pycnopodia_helianthoides/Pycnopodia_helianthoides_metapars.utr.cfg
7389 2022-09-23 19:06 config/species/Pycnopodia_helianthoides/Pycnopodia_helianthoides_parameters.cfg
810 2022-09-23 19:06 config/species/Pycnopodia_helianthoides/Pycnopodia_helianthoides_weightmatrix.txt
1626 2022-09-23 19:06 config/species/Pycnopodia_helianthoides/README.txt
2022-09-23 19:06 config/species/Raphidocelis_subcapitata/
1562 2022-09-23 19:06 config/species/Raphidocelis_subcapitata/README.txt
233908 2022-09-23 19:06 config/species/Raphidocelis_subcapitata/Raphidocelis_subcapitata_exon_probs.pbl
32715 2022-09-23 19:06 config/species/Raphidocelis_subcapitata/Raphidocelis_subcapitata_igenic_probs.pbl
143386 2022-09-23 19:06 config/species/Raphidocelis_subcapitata/Raphidocelis_subcapitata_intron_probs.pbl
2057 2022-09-23 19:06 config/species/Raphidocelis_subcapitata/Raphidocelis_subcapitata_metapars.cfg
1125 2022-09-23 19:06 config/species/Raphidocelis_subcapitata/Raphidocelis_subcapitata_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/Raphidocelis_subcapitata/Raphidocelis_subcapitata_metapars.utr.cfg
7395 2022-09-23 19:06 config/species/Raphidocelis_subcapitata/Raphidocelis_subcapitata_parameters.cfg
810 2022-09-23 19:06 config/species/Raphidocelis_subcapitata/Raphidocelis_subcapitata_weightmatrix.txt
2022-09-23 19:06 config/species/Rhopilema_esculentum/
1656 2022-09-23 19:06 config/species/Rhopilema_esculentum/README.txt
231075 2022-09-23 19:06 config/species/Rhopilema_esculentum/Rhopilema_esculentum_exon_probs.pbl
32612 2022-09-23 19:06 config/species/Rhopilema_esculentum/Rhopilema_esculentum_igenic_probs.pbl
373024 2022-09-23 19:06 config/species/Rhopilema_esculentum/Rhopilema_esculentum_intron_probs.pbl
2057 2022-09-23 19:06 config/species/Rhopilema_esculentum/Rhopilema_esculentum_metapars.cfg
1125 2022-09-23 19:06 config/species/Rhopilema_esculentum/Rhopilema_esculentum_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/Rhopilema_esculentum/Rhopilema_esculentum_metapars.utr.cfg
7353 2022-09-23 19:06 config/species/Rhopilema_esculentum/Rhopilema_esculentum_parameters.cfg
810 2022-09-23 19:06 config/species/Rhopilema_esculentum/Rhopilema_esculentum_weightmatrix.txt
2022-09-23 19:06 config/species/Ricinus_communis/
1730 2022-09-23 19:06 config/species/Ricinus_communis/README.txt
453639 2022-09-23 19:06 config/species/Ricinus_communis/Ricinus_communis_exon_probs.pbl
65337 2022-09-23 19:06 config/species/Ricinus_communis/Ricinus_communis_igenic_probs.pbl
215736 2022-09-23 19:06 config/species/Ricinus_communis/Ricinus_communis_intron_probs.pbl
2057 2022-09-23 19:06 config/species/Ricinus_communis/Ricinus_communis_metapars.cfg
1125 2022-09-23 19:06 config/species/Ricinus_communis/Ricinus_communis_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/Ricinus_communis/Ricinus_communis_metapars.utr.cfg
7310 2022-09-23 19:06 config/species/Ricinus_communis/Ricinus_communis_parameters.cfg
810 2022-09-23 19:06 config/species/Ricinus_communis/Ricinus_communis_weightmatrix.txt
2022-09-23 19:06 config/species/Sclerotinia_sclerotiorum/
1606 2022-09-23 19:06 config/species/Sclerotinia_sclerotiorum/README.txt
256985 2022-09-23 19:06 config/species/Sclerotinia_sclerotiorum/Sclerotinia_sclerotiorum_exon_probs.pbl
32510 2022-09-23 19:06 config/species/Sclerotinia_sclerotiorum/Sclerotinia_sclerotiorum_igenic_probs.pbl
88077 2022-09-23 19:06 config/species/Sclerotinia_sclerotiorum/Sclerotinia_sclerotiorum_intron_probs.pbl
2057 2022-09-23 19:06 config/species/Sclerotinia_sclerotiorum/Sclerotinia_sclerotiorum_metapars.cfg
1125 2022-09-23 19:06 config/species/Sclerotinia_sclerotiorum/Sclerotinia_sclerotiorum_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/Sclerotinia_sclerotiorum/Sclerotinia_sclerotiorum_metapars.utr.cfg
7396 2022-09-23 19:06 config/species/Sclerotinia_sclerotiorum/Sclerotinia_sclerotiorum_parameters.cfg
810 2022-09-23 19:06 config/species/Sclerotinia_sclerotiorum/Sclerotinia_sclerotiorum_weightmatrix.txt
2022-09-23 19:06 config/species/Skeletonema_costatum/
1676 2022-09-23 19:06 config/species/Skeletonema_costatum/README.txt
242394 2022-09-23 19:06 config/species/Skeletonema_costatum/Skeletonema_costatum_exon_probs.pbl
32530 2022-09-23 19:06 config/species/Skeletonema_costatum/Skeletonema_costatum_igenic_probs.pbl
100312 2022-09-23 19:06 config/species/Skeletonema_costatum/Skeletonema_costatum_intron_probs.pbl
2057 2022-09-23 19:06 config/species/Skeletonema_costatum/Skeletonema_costatum_metapars.cfg
1125 2022-09-23 19:06 config/species/Skeletonema_costatum/Skeletonema_costatum_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/Skeletonema_costatum/Skeletonema_costatum_metapars.utr.cfg
7353 2022-09-23 19:06 config/species/Skeletonema_costatum/Skeletonema_costatum_parameters.cfg
810 2022-09-23 19:06 config/species/Skeletonema_costatum/Skeletonema_costatum_weightmatrix.txt
2022-09-23 19:06 config/species/Sordaria_macrospora/
1455 2022-09-23 19:06 config/species/Sordaria_macrospora/README.txt
249461 2022-09-23 19:06 config/species/Sordaria_macrospora/Sordaria_macrospora_exon_probs.pbl
32485 2022-09-23 19:06 config/species/Sordaria_macrospora/Sordaria_macrospora_igenic_probs.pbl
330638 2022-09-23 19:06 config/species/Sordaria_macrospora/Sordaria_macrospora_intron_probs.pbl
2057 2022-09-23 19:06 config/species/Sordaria_macrospora/Sordaria_macrospora_metapars.cfg
1125 2022-09-23 19:06 config/species/Sordaria_macrospora/Sordaria_macrospora_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/Sordaria_macrospora/Sordaria_macrospora_metapars.utr.cfg
7337 2022-09-23 19:06 config/species/Sordaria_macrospora/Sordaria_macrospora_parameters.cfg
810 2022-09-23 19:06 config/species/Sordaria_macrospora/Sordaria_macrospora_weightmatrix.txt
2022-09-23 19:06 config/species/Sphaceloma_murrayae/
1487 2022-09-23 19:06 config/species/Sphaceloma_murrayae/README.txt
259057 2022-09-23 19:06 config/species/Sphaceloma_murrayae/Sphaceloma_murrayae_exon_probs.pbl
32409 2022-09-23 19:06 config/species/Sphaceloma_murrayae/Sphaceloma_murrayae_igenic_probs.pbl
320022 2022-09-23 19:06 config/species/Sphaceloma_murrayae/Sphaceloma_murrayae_intron_probs.pbl
2057 2022-09-23 19:06 config/species/Sphaceloma_murrayae/Sphaceloma_murrayae_metapars.cfg
1125 2022-09-23 19:06 config/species/Sphaceloma_murrayae/Sphaceloma_murrayae_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/Sphaceloma_murrayae/Sphaceloma_murrayae_metapars.utr.cfg
7340 2022-09-23 19:06 config/species/Sphaceloma_murrayae/Sphaceloma_murrayae_parameters.cfg
810 2022-09-23 19:06 config/species/Sphaceloma_murrayae/Sphaceloma_murrayae_weightmatrix.txt
2022-09-23 19:06 config/species/Taeniopygia_guttata/
1821 2022-09-23 19:06 config/species/Taeniopygia_guttata/README.txt
635833 2022-09-23 19:06 config/species/Taeniopygia_guttata/Taeniopygia_guttata_exon_probs.pbl
97608 2022-09-23 19:06 config/species/Taeniopygia_guttata/Taeniopygia_guttata_igenic_probs.pbl
284956 2022-09-23 19:06 config/species/Taeniopygia_guttata/Taeniopygia_guttata_intron_probs.pbl
2057 2022-09-23 19:06 config/species/Taeniopygia_guttata/Taeniopygia_guttata_metapars.cfg
1125 2022-09-23 19:06 config/species/Taeniopygia_guttata/Taeniopygia_guttata_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/Taeniopygia_guttata/Taeniopygia_guttata_metapars.utr.cfg
7343 2022-09-23 19:06 config/species/Taeniopygia_guttata/Taeniopygia_guttata_parameters.cfg
810 2022-09-23 19:06 config/species/Taeniopygia_guttata/Taeniopygia_guttata_weightmatrix.txt
2022-09-23 19:06 config/species/Thalassiosira_pseudonana_CCMP1335/
1654 2022-09-23 19:06 config/species/Thalassiosira_pseudonana_CCMP1335/README.txt
257107 2022-09-23 19:06 config/species/Thalassiosira_pseudonana_CCMP1335/Thalassiosira_pseudonana_CCMP1335_exon_probs.pbl
32504 2022-09-23 19:06 config/species/Thalassiosira_pseudonana_CCMP1335/Thalassiosira_pseudonana_CCMP1335_igenic_probs.pbl
380615 2022-09-23 19:06 config/species/Thalassiosira_pseudonana_CCMP1335/Thalassiosira_pseudonana_CCMP1335_intron_probs.pbl
2057 2022-09-23 19:06 config/species/Thalassiosira_pseudonana_CCMP1335/Thalassiosira_pseudonana_CCMP1335_metapars.cfg
1125 2022-09-23 19:06 config/species/Thalassiosira_pseudonana_CCMP1335/Thalassiosira_pseudonana_CCMP1335_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/Thalassiosira_pseudonana_CCMP1335/Thalassiosira_pseudonana_CCMP1335_metapars.utr.cfg
7493 2022-09-23 19:06 config/species/Thalassiosira_pseudonana_CCMP1335/Thalassiosira_pseudonana_CCMP1335_parameters.cfg
810 2022-09-23 19:06 config/species/Thalassiosira_pseudonana_CCMP1335/Thalassiosira_pseudonana_CCMP1335_weightmatrix.txt
2022-09-23 19:06 config/species/Trichoplax_adhaerens/
1519 2022-09-23 19:06 config/species/Trichoplax_adhaerens/README.txt
229484 2022-09-23 19:06 config/species/Trichoplax_adhaerens/Trichoplax_adhaerens_exon_probs.pbl
32565 2022-09-23 19:06 config/species/Trichoplax_adhaerens/Trichoplax_adhaerens_igenic_probs.pbl
97582 2022-09-23 19:06 config/species/Trichoplax_adhaerens/Trichoplax_adhaerens_intron_probs.pbl
2057 2022-09-23 19:06 config/species/Trichoplax_adhaerens/Trichoplax_adhaerens_metapars.cfg
1125 2022-09-23 19:06 config/species/Trichoplax_adhaerens/Trichoplax_adhaerens_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/Trichoplax_adhaerens/Trichoplax_adhaerens_metapars.utr.cfg
7351 2022-09-23 19:06 config/species/Trichoplax_adhaerens/Trichoplax_adhaerens_parameters.cfg
810 2022-09-23 19:06 config/species/Trichoplax_adhaerens/Trichoplax_adhaerens_weightmatrix.txt
2022-09-23 19:06 config/species/Trypanosoma_cruzi/
1546 2022-09-23 19:06 config/species/Trypanosoma_cruzi/README.txt
762759 2022-09-23 19:06 config/species/Trypanosoma_cruzi/Trypanosoma_cruzi_exon_probs.pbl
130684 2022-09-23 19:06 config/species/Trypanosoma_cruzi/Trypanosoma_cruzi_igenic_probs.pbl
198017 2022-09-23 19:06 config/species/Trypanosoma_cruzi/Trypanosoma_cruzi_intron_probs.pbl
2057 2022-09-23 19:06 config/species/Trypanosoma_cruzi/Trypanosoma_cruzi_metapars.cfg
1125 2022-09-23 19:06 config/species/Trypanosoma_cruzi/Trypanosoma_cruzi_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/Trypanosoma_cruzi/Trypanosoma_cruzi_metapars.utr.cfg
7316 2022-09-23 19:06 config/species/Trypanosoma_cruzi/Trypanosoma_cruzi_parameters.cfg
810 2022-09-23 19:06 config/species/Trypanosoma_cruzi/Trypanosoma_cruzi_weightmatrix.txt
2022-09-23 19:06 config/species/Vitis_vinifera/
1568 2022-09-23 19:06 config/species/Vitis_vinifera/README.txt
399405 2022-09-23 19:06 config/species/Vitis_vinifera/Vitis_vinifera_exon_probs.pbl
65292 2022-09-23 19:06 config/species/Vitis_vinifera/Vitis_vinifera_igenic_probs.pbl
207609 2022-09-23 19:06 config/species/Vitis_vinifera/Vitis_vinifera_intron_probs.pbl
2057 2022-09-23 19:06 config/species/Vitis_vinifera/Vitis_vinifera_metapars.cfg
1125 2022-09-23 19:06 config/species/Vitis_vinifera/Vitis_vinifera_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/Vitis_vinifera/Vitis_vinifera_metapars.utr.cfg
7288 2022-09-23 19:06 config/species/Vitis_vinifera/Vitis_vinifera_parameters.cfg
810 2022-09-23 19:06 config/species/Vitis_vinifera/Vitis_vinifera_weightmatrix.txt
2022-09-23 19:06 config/species/Vitrella_brassicaformis/
1613 2022-09-23 19:06 config/species/Vitrella_brassicaformis/README.txt
260235 2022-09-23 19:06 config/species/Vitrella_brassicaformis/Vitrella_brassicaformis_exon_probs.pbl
32484 2022-09-23 19:06 config/species/Vitrella_brassicaformis/Vitrella_brassicaformis_igenic_probs.pbl
343629 2022-09-23 19:06 config/species/Vitrella_brassicaformis/Vitrella_brassicaformis_intron_probs.pbl
2057 2022-09-23 19:06 config/species/Vitrella_brassicaformis/Vitrella_brassicaformis_metapars.cfg
1125 2022-09-23 19:06 config/species/Vitrella_brassicaformis/Vitrella_brassicaformis_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/Vitrella_brassicaformis/Vitrella_brassicaformis_metapars.utr.cfg
7387 2022-09-23 19:06 config/species/Vitrella_brassicaformis/Vitrella_brassicaformis_parameters.cfg
810 2022-09-23 19:06 config/species/Vitrella_brassicaformis/Vitrella_brassicaformis_weightmatrix.txt
2022-09-23 19:06 config/species/Xenopus_tropicalis/
243087 2022-09-23 19:06 config/species/Xenopus_tropicalis/Xenopus_tropicalis_exon_probs.pbl
32539 2022-09-23 19:06 config/species/Xenopus_tropicalis/Xenopus_tropicalis_igenic_probs.pbl
356478 2022-09-23 19:06 config/species/Xenopus_tropicalis/Xenopus_tropicalis_intron_probs.pbl
2057 2022-09-23 19:06 config/species/Xenopus_tropicalis/Xenopus_tropicalis_metapars.cfg
1125 2022-09-23 19:06 config/species/Xenopus_tropicalis/Xenopus_tropicalis_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/Xenopus_tropicalis/Xenopus_tropicalis_metapars.utr.cfg
7588 2022-09-23 19:06 config/species/Xenopus_tropicalis/Xenopus_tropicalis_parameters.cfg
810 2022-09-23 19:06 config/species/Xenopus_tropicalis/Xenopus_tropicalis_weightmatrix.txt
2022-09-23 19:06 config/species/Xiphophorus_maculatus/
94 2022-09-23 19:06 config/species/Xiphophorus_maculatus/README.txt
390465 2022-09-23 19:06 config/species/Xiphophorus_maculatus/Xiphophorus_maculatus_exon_probs.pbl
65090 2022-09-23 19:06 config/species/Xiphophorus_maculatus/Xiphophorus_maculatus_igenic_probs.pbl
185355 2022-09-23 19:06 config/species/Xiphophorus_maculatus/Xiphophorus_maculatus_intron_probs.pbl
7374 2022-09-23 19:06 config/species/Xiphophorus_maculatus/Xiphophorus_maculatus_parameters.cfg
121839 2022-09-23 19:06 config/species/Xiphophorus_maculatus/Xiphophorus_maculatus_utr_probs.pbl
810 2022-09-23 19:06 config/species/Xiphophorus_maculatus/Xiphophorus_maculatus_weightmatrix.txt
2022-09-23 19:06 config/species/Xipophorus_maculatus/
390465 2022-09-23 19:06 config/species/Xipophorus_maculatus/Xipophorus_maculatus_exon_probs.pbl
65090 2022-09-23 19:06 config/species/Xipophorus_maculatus/Xipophorus_maculatus_igenic_probs.pbl
185355 2022-09-23 19:06 config/species/Xipophorus_maculatus/Xipophorus_maculatus_intron_probs.pbl
7374 2022-09-23 19:06 config/species/Xipophorus_maculatus/Xipophorus_maculatus_parameters.cfg
121839 2022-09-23 19:06 config/species/Xipophorus_maculatus/Xipophorus_maculatus_utr_probs.pbl
810 2022-09-23 19:06 config/species/Xipophorus_maculatus/Xipophorus_maculatus_weightmatrix.txt
2022-09-23 19:06 config/species/adorsata/
8386 2022-09-23 19:06 config/species/adorsata/adorsata_parameters.cfg
810 2022-09-23 19:06 config/species/adorsata/adorsata_weightmatrix.txt
260623 2022-09-23 19:06 config/species/adorsata/generic_exon_probs.pbl
32792 2022-09-23 19:06 config/species/adorsata/generic_igenic_probs.pbl
344907 2022-09-23 19:06 config/species/adorsata/generic_intron_probs.pbl
810 2022-09-23 19:06 config/species/adorsata/generic_weightmatrix.txt
2022-09-23 19:06 config/species/aedes/
878932 2022-09-23 19:06 config/species/aedes/aedes_exon_probs.pbl
140772 2022-09-23 19:06 config/species/aedes/aedes_igenic_probs.pbl
153809 2022-09-23 19:06 config/species/aedes/aedes_intron_probs.pbl
3994 2022-09-23 19:06 config/species/aedes/aedes_parameters.cfg
801 2022-09-23 19:06 config/species/aedes/aedes_weightmatrix.txt
2022-09-23 19:06 config/species/amphimedon/
323840 2022-09-23 19:06 config/species/amphimedon/amphimedon_exon_probs.pbl
45327 2022-09-23 19:06 config/species/amphimedon/amphimedon_igenic_probs.pbl
59205 2022-09-23 19:06 config/species/amphimedon/amphimedon_intron_probs.pbl
2377 2022-09-23 19:06 config/species/amphimedon/amphimedon_metapars.cfg
6892 2022-09-23 19:06 config/species/amphimedon/amphimedon_parameters.cfg
121407 2022-09-23 19:06 config/species/amphimedon/amphimedon_utr_probs.pbl
810 2022-09-23 19:06 config/species/amphimedon/amphimedon_weightmatrix.txt
2022-09-23 19:06 config/species/ancylostoma_ceylanicum/
608 2022-09-23 19:06 config/species/ancylostoma_ceylanicum/README.TXT
244514 2022-09-23 19:06 config/species/ancylostoma_ceylanicum/ancylostoma_ceylanicum_exon_probs.pbl
32498 2022-09-23 19:06 config/species/ancylostoma_ceylanicum/ancylostoma_ceylanicum_igenic_probs.pbl
351321 2022-09-23 19:06 config/species/ancylostoma_ceylanicum/ancylostoma_ceylanicum_intron_probs.pbl
2057 2022-09-23 19:06 config/species/ancylostoma_ceylanicum/ancylostoma_ceylanicum_metapars.cfg
1355 2022-09-23 19:06 config/species/ancylostoma_ceylanicum/ancylostoma_ceylanicum_metapars.utr.cfg
7369 2022-09-23 19:06 config/species/ancylostoma_ceylanicum/ancylostoma_ceylanicum_parameters.cfg
810 2022-09-23 19:06 config/species/ancylostoma_ceylanicum/ancylostoma_ceylanicum_weightmatrix.txt
2022-09-23 19:06 config/species/anidulans/
1012355 2022-09-23 19:06 config/species/anidulans/anidulans_exon_probs.pbl
140203 2022-09-23 19:06 config/species/anidulans/anidulans_igenic_probs.pbl
176440 2022-09-23 19:06 config/species/anidulans/anidulans_intron_probs.pbl
4120 2022-09-23 19:06 config/species/anidulans/anidulans_parameters.cfg
800 2022-09-23 19:06 config/species/anidulans/anidulans_weightmatrix.txt
2022-09-23 19:06 config/species/arabidopsis/
433381 2022-09-23 19:06 config/species/arabidopsis/arabidopsis_exon_probs.pbl
46188 2022-09-23 19:06 config/species/arabidopsis/arabidopsis_igenic_probs.pbl
167119 2022-09-23 19:06 config/species/arabidopsis/arabidopsis_intron_probs.pbl
6101 2022-09-23 19:06 config/species/arabidopsis/arabidopsis_parameters.cfg
93284 2022-09-23 19:06 config/species/arabidopsis/arabidopsis_utr_probs.pbl
801 2022-09-23 19:06 config/species/arabidopsis/arabidopsis_weightmatrix.txt
2022-09-23 19:06 config/species/aspergillus_fumigatus/
974446 2022-09-23 19:06 config/species/aspergillus_fumigatus/aspergillus_fumigatus_exon_probs.pbl
138249 2022-09-23 19:06 config/species/aspergillus_fumigatus/aspergillus_fumigatus_igenic_probs.pbl
178715 2022-09-23 19:06 config/species/aspergillus_fumigatus/aspergillus_fumigatus_intron_probs.pbl
1860 2022-09-23 19:06 config/species/aspergillus_fumigatus/aspergillus_fumigatus_metapars.cfg
6837 2022-09-23 19:06 config/species/aspergillus_fumigatus/aspergillus_fumigatus_parameters.cfg
810 2022-09-23 19:06 config/species/aspergillus_fumigatus/aspergillus_fumigatus_weightmatrix.txt
2022-09-23 19:06 config/species/aspergillus_nidulans/
320412 2022-09-23 19:06 config/species/aspergillus_nidulans/aspergillus_nidulans_exon_probs.pbl
46658 2022-09-23 19:06 config/species/aspergillus_nidulans/aspergillus_nidulans_igenic_probs.pbl
52240 2022-09-23 19:06 config/species/aspergillus_nidulans/aspergillus_nidulans_intron_probs.pbl
1860 2022-09-23 19:06 config/species/aspergillus_nidulans/aspergillus_nidulans_metapars.cfg
6824 2022-09-23 19:06 config/species/aspergillus_nidulans/aspergillus_nidulans_parameters.cfg
810 2022-09-23 19:06 config/species/aspergillus_nidulans/aspergillus_nidulans_weightmatrix.txt
2022-09-23 19:06 config/species/aspergillus_oryzae/
953434 2022-09-23 19:06 config/species/aspergillus_oryzae/aspergillus_oryzae_exon_probs.pbl
139245 2022-09-23 19:06 config/species/aspergillus_oryzae/aspergillus_oryzae_igenic_probs.pbl
205038 2022-09-23 19:06 config/species/aspergillus_oryzae/aspergillus_oryzae_intron_probs.pbl
1860 2022-09-23 19:06 config/species/aspergillus_oryzae/aspergillus_oryzae_metapars.cfg
6804 2022-09-23 19:06 config/species/aspergillus_oryzae/aspergillus_oryzae_parameters.cfg
810 2022-09-23 19:06 config/species/aspergillus_oryzae/aspergillus_oryzae_weightmatrix.txt
2022-09-23 19:06 config/species/aspergillus_terreus/
336182 2022-09-23 19:06 config/species/aspergillus_terreus/aspergillus_terreus_exon_probs.pbl
46627 2022-09-23 19:06 config/species/aspergillus_terreus/aspergillus_terreus_igenic_probs.pbl
137431 2022-09-23 19:06 config/species/aspergillus_terreus/aspergillus_terreus_intron_probs.pbl
1860 2022-09-23 19:06 config/species/aspergillus_terreus/aspergillus_terreus_metapars.cfg
6818 2022-09-23 19:06 config/species/aspergillus_terreus/aspergillus_terreus_parameters.cfg
810 2022-09-23 19:06 config/species/aspergillus_terreus/aspergillus_terreus_weightmatrix.txt
2022-09-23 19:06 config/species/b_pseudomallei/
383002 2022-09-23 19:06 config/species/b_pseudomallei/b_pseudomallei_exon_probs.pbl
39584 2022-09-23 19:06 config/species/b_pseudomallei/b_pseudomallei_igenic_probs.pbl
1521 2022-09-23 19:06 config/species/b_pseudomallei/b_pseudomallei_metapars.cfg
1355 2022-09-23 19:06 config/species/b_pseudomallei/b_pseudomallei_metapars.utr.cfg
2400 2022-09-23 19:06 config/species/b_pseudomallei/b_pseudomallei_ovlp_len.pbl
7589 2022-09-23 19:06 config/species/b_pseudomallei/b_pseudomallei_parameters.cfg
7585 2022-09-23 19:06 config/species/b_pseudomallei/b_pseudomallei_parameters.cfg.orig1
7585 2022-09-23 19:06 config/species/b_pseudomallei/b_pseudomallei_parameters.cfg.orig2
1403 2022-09-23 19:06 config/species/b_pseudomallei/b_pseudomallei_trans_shadow_bacterium.pbl
810 2022-09-23 19:06 config/species/b_pseudomallei/b_pseudomallei_weightmatrix.txt
2022-09-23 19:06 config/species/bombus_impatiens1/
738558 2022-09-23 19:06 config/species/bombus_impatiens1/bombus_impatiens1_exon_probs.pbl
260808 2022-09-23 19:06 config/species/bombus_impatiens1/bombus_impatiens1_exon_probs.pbl.withoutCRF
130533 2022-09-23 19:06 config/species/bombus_impatiens1/bombus_impatiens1_igenic_probs.pbl
32599 2022-09-23 19:06 config/species/bombus_impatiens1/bombus_impatiens1_igenic_probs.pbl.withoutCRF
139244 2022-09-23 19:06 config/species/bombus_impatiens1/bombus_impatiens1_intron_probs.pbl
148305 2022-09-23 19:06 config/species/bombus_impatiens1/bombus_impatiens1_intron_probs.pbl.withoutCRF
2057 2022-09-23 19:06 config/species/bombus_impatiens1/bombus_impatiens1_metapars.cfg
1355 2022-09-23 19:06 config/species/bombus_impatiens1/bombus_impatiens1_metapars.utr.cfg
7310 2022-09-23 19:06 config/species/bombus_impatiens1/bombus_impatiens1_parameters.cfg
7310 2022-09-23 19:06 config/species/bombus_impatiens1/bombus_impatiens1_parameters.cfg.orig1
7308 2022-09-23 19:06 config/species/bombus_impatiens1/bombus_impatiens1_parameters.cfg.orig2
7314 2022-09-23 19:06 config/species/bombus_impatiens1/bombus_impatiens1_parameters.cfg.orig3
7311 2022-09-23 19:06 config/species/bombus_impatiens1/bombus_impatiens1_parameters.cfg.orig4
7313 2022-09-23 19:06 config/species/bombus_impatiens1/bombus_impatiens1_parameters.cfg.orig5
810 2022-09-23 19:06 config/species/bombus_impatiens1/bombus_impatiens1_weightmatrix.txt
2022-09-23 19:06 config/species/bombus_terrestris2/
1204455 2022-09-23 19:06 config/species/bombus_terrestris2/bombus_terrestris2_exon_probs.pbl
222280 2022-09-23 19:06 config/species/bombus_terrestris2/bombus_terrestris2_exon_probs.pbl.withoutCRF
228232 2022-09-23 19:06 config/species/bombus_terrestris2/bombus_terrestris2_igenic_probs.pbl
32679 2022-09-23 19:06 config/species/bombus_terrestris2/bombus_terrestris2_igenic_probs.pbl.withoutCRF
333779 2022-09-23 19:06 config/species/bombus_terrestris2/bombus_terrestris2_intron_probs.pbl
105391 2022-09-23 19:06 config/species/bombus_terrestris2/bombus_terrestris2_intron_probs.pbl.withoutCRF
2058 2022-09-23 19:06 config/species/bombus_terrestris2/bombus_terrestris2_metapars.cfg
1355 2022-09-23 19:06 config/species/bombus_terrestris2/bombus_terrestris2_metapars.utr.cfg
7336 2022-09-23 19:06 config/species/bombus_terrestris2/bombus_terrestris2_parameters.cfg
7221 2022-09-23 19:06 config/species/bombus_terrestris2/bombus_terrestris2_parameters.cfg.orig1
7337 2022-09-23 19:06 config/species/bombus_terrestris2/bombus_terrestris2_parameters.cfg.orig2
7336 2022-09-23 19:06 config/species/bombus_terrestris2/bombus_terrestris2_parameters.cfg.orig3
7336 2022-09-23 19:06 config/species/bombus_terrestris2/bombus_terrestris2_parameters.cfg.orig4
352514 2022-09-23 19:06 config/species/bombus_terrestris2/bombus_terrestris2_utr_probs.pbl
810 2022-09-23 19:06 config/species/bombus_terrestris2/bombus_terrestris2_weightmatrix.txt
2022-09-23 19:06 config/species/botrytis_cinerea/
330915 2022-09-23 19:06 config/species/botrytis_cinerea/botrytis_cinerea_exon_probs.pbl
46253 2022-09-23 19:06 config/species/botrytis_cinerea/botrytis_cinerea_igenic_probs.pbl
147068 2022-09-23 19:06 config/species/botrytis_cinerea/botrytis_cinerea_intron_probs.pbl
1860 2022-09-23 19:06 config/species/botrytis_cinerea/botrytis_cinerea_metapars.cfg
6779 2022-09-23 19:06 config/species/botrytis_cinerea/botrytis_cinerea_parameters.cfg
810 2022-09-23 19:06 config/species/botrytis_cinerea/botrytis_cinerea_weightmatrix.txt
2022-09-23 19:06 config/species/brugia/
2637768 2022-09-23 19:06 config/species/brugia/brugia_exon_probs.pbl
367516 2022-09-23 19:06 config/species/brugia/brugia_igenic_probs.pbl
288045 2022-09-23 19:06 config/species/brugia/brugia_intron_probs.pbl
4029 2022-09-23 19:06 config/species/brugia/brugia_parameters.cfg
404589 2022-09-23 19:06 config/species/brugia/brugia_splicefile
805 2022-09-23 19:06 config/species/brugia/brugia_weightmatrix.txt
2022-09-23 19:06 config/species/c_elegans_trsk/
227124 2022-09-23 19:06 config/species/c_elegans_trsk/c_elegans_trsk_exon_probs.pbl
227124 2022-09-23 19:06 config/species/c_elegans_trsk/c_elegans_trsk_exon_probs.pbl.withoutCRF
32573 2022-09-23 19:06 config/species/c_elegans_trsk/c_elegans_trsk_igenic_probs.pbl
32573 2022-09-23 19:06 config/species/c_elegans_trsk/c_elegans_trsk_igenic_probs.pbl.withoutCRF
151262 2022-09-23 19:06 config/species/c_elegans_trsk/c_elegans_trsk_intron_probs.pbl
151262 2022-09-23 19:06 config/species/c_elegans_trsk/c_elegans_trsk_intron_probs.pbl.withoutCRF
2057 2022-09-23 19:06 config/species/c_elegans_trsk/c_elegans_trsk_metapars.cfg
1355 2022-09-23 19:06 config/species/c_elegans_trsk/c_elegans_trsk_metapars.utr.cfg
7288 2022-09-23 19:06 config/species/c_elegans_trsk/c_elegans_trsk_parameters.cfg
82480 2022-09-23 19:06 config/species/c_elegans_trsk/c_elegans_trsk_utr_probs.pbl
810 2022-09-23 19:06 config/species/c_elegans_trsk/c_elegans_trsk_weightmatrix.txt
2022-09-23 19:06 config/species/cacao/
227729 2022-09-23 19:06 config/species/cacao/cacao_exon_probs.pbl
32621 2022-09-23 19:06 config/species/cacao/cacao_igenic_probs.pbl
105835 2022-09-23 19:06 config/species/cacao/cacao_intron_probs.pbl
2057 2022-09-23 19:06 config/species/cacao/cacao_metapars.cfg
1355 2022-09-23 19:06 config/species/cacao/cacao_metapars.utr.cfg
7311 2022-09-23 19:06 config/species/cacao/cacao_parameters.cfg
84221 2022-09-23 19:06 config/species/cacao/cacao_utr_probs.pbl
810 2022-09-23 19:06 config/species/cacao/cacao_weightmatrix.txt
2022-09-23 19:06 config/species/caenorhabditis/
327878 2022-09-23 19:06 config/species/caenorhabditis/caenorhabditis_exon_probs.pbl
45273 2022-09-23 19:06 config/species/caenorhabditis/caenorhabditis_igenic_probs.pbl
50818 2022-09-23 19:06 config/species/caenorhabditis/caenorhabditis_intron_probs.pbl
2523 2022-09-23 19:06 config/species/caenorhabditis/caenorhabditis_metapars.cfg
6744 2022-09-23 19:06 config/species/caenorhabditis/caenorhabditis_parameters.cfg
14444 2022-09-23 19:06 config/species/caenorhabditis/caenorhabditis_trans_shadow_partial_utr.pbl
117067 2022-09-23 19:06 config/species/caenorhabditis/caenorhabditis_utr_probs.pbl
810 2022-09-23 19:06 config/species/caenorhabditis/caenorhabditis_weightmatrix.txt
2022-09-23 19:06 config/species/camponotus_floridanus/
2258 2022-09-23 19:06 config/species/camponotus_floridanus/README.TXT
227917 2022-09-23 19:06 config/species/camponotus_floridanus/camponotus_floridanus_exon_probs.pbl
32637 2022-09-23 19:06 config/species/camponotus_floridanus/camponotus_floridanus_igenic_probs.pbl
110070 2022-09-23 19:06 config/species/camponotus_floridanus/camponotus_floridanus_intron_probs.pbl
2057 2022-09-23 19:06 config/species/camponotus_floridanus/camponotus_floridanus_metapars.cfg
1355 2022-09-23 19:06 config/species/camponotus_floridanus/camponotus_floridanus_metapars.utr.cfg
7392 2022-09-23 19:06 config/species/camponotus_floridanus/camponotus_floridanus_parameters.cfg
810 2022-09-23 19:06 config/species/camponotus_floridanus/camponotus_floridanus_weightmatrix.txt
2022-09-23 19:06 config/species/candida_albicans/
359498 2022-09-23 19:06 config/species/candida_albicans/candida_albicans_exon_probs.pbl
45152 2022-09-23 19:06 config/species/candida_albicans/candida_albicans_igenic_probs.pbl
86067 2022-09-23 19:06 config/species/candida_albicans/candida_albicans_intron_probs.pbl
1860 2022-09-23 19:06 config/species/candida_albicans/candida_albicans_metapars.cfg
6781 2022-09-23 19:06 config/species/candida_albicans/candida_albicans_parameters.cfg
810 2022-09-23 19:06 config/species/candida_albicans/candida_albicans_weightmatrix.txt
2022-09-23 19:06 config/species/candida_guilliermondii/
343565 2022-09-23 19:06 config/species/candida_guilliermondii/candida_guilliermondii_exon_probs.pbl
45629 2022-09-23 19:06 config/species/candida_guilliermondii/candida_guilliermondii_igenic_probs.pbl
36792 2022-09-23 19:06 config/species/candida_guilliermondii/candida_guilliermondii_intron_probs.pbl
1860 2022-09-23 19:06 config/species/candida_guilliermondii/candida_guilliermondii_metapars.cfg
6845 2022-09-23 19:06 config/species/candida_guilliermondii/candida_guilliermondii_parameters.cfg
810 2022-09-23 19:06 config/species/candida_guilliermondii/candida_guilliermondii_weightmatrix.txt
2022-09-23 19:06 config/species/candida_tropicalis/
338195 2022-09-23 19:06 config/species/candida_tropicalis/candida_tropicalis_exon_probs.pbl
45158 2022-09-23 19:06 config/species/candida_tropicalis/candida_tropicalis_igenic_probs.pbl
138501 2022-09-23 19:06 config/species/candida_tropicalis/candida_tropicalis_intron_probs.pbl
1860 2022-09-23 19:06 config/species/candida_tropicalis/candida_tropicalis_metapars.cfg
6801 2022-09-23 19:06 config/species/candida_tropicalis/candida_tropicalis_parameters.cfg
810 2022-09-23 19:06 config/species/candida_tropicalis/candida_tropicalis_weightmatrix.txt
2022-09-23 19:06 config/species/chaetomium_globosum/
349242 2022-09-23 19:06 config/species/chaetomium_globosum/chaetomium_globosum_exon_probs.pbl
46682 2022-09-23 19:06 config/species/chaetomium_globosum/chaetomium_globosum_igenic_probs.pbl
375594 2022-09-23 19:06 config/species/chaetomium_globosum/chaetomium_globosum_intron_probs.pbl
1860 2022-09-23 19:06 config/species/chaetomium_globosum/chaetomium_globosum_metapars.cfg
6812 2022-09-23 19:06 config/species/chaetomium_globosum/chaetomium_globosum_parameters.cfg
810 2022-09-23 19:06 config/species/chaetomium_globosum/chaetomium_globosum_weightmatrix.txt
2022-09-23 19:06 config/species/chicken/
999 2022-09-23 19:06 config/species/chicken/README.TXT
2132567 2022-09-23 19:06 config/species/chicken/chicken_exon_probs.pbl
325304 2022-09-23 19:06 config/species/chicken/chicken_igenic_probs.pbl
1075557 2022-09-23 19:06 config/species/chicken/chicken_intron_probs.pbl
2057 2022-09-23 19:06 config/species/chicken/chicken_metapars.cfg
1355 2022-09-23 19:06 config/species/chicken/chicken_metapars.utr.cfg
7198 2022-09-23 19:06 config/species/chicken/chicken_parameters.cfg
810 2022-09-23 19:06 config/species/chicken/chicken_weightmatrix.txt
2022-09-23 19:06 config/species/chiloscyllium/
236940 2022-09-23 19:06 config/species/chiloscyllium/chiloscyllium_exon_probs.pbl
32468 2022-09-23 19:06 config/species/chiloscyllium/chiloscyllium_igenic_probs.pbl
115762 2022-09-23 19:06 config/species/chiloscyllium/chiloscyllium_intron_probs.pbl
2057 2022-09-23 19:06 config/species/chiloscyllium/chiloscyllium_metapars.cfg
1125 2022-09-23 19:06 config/species/chiloscyllium/chiloscyllium_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/chiloscyllium/chiloscyllium_metapars.utr.cfg
7346 2022-09-23 19:06 config/species/chiloscyllium/chiloscyllium_parameters.cfg
7270 2022-09-23 19:06 config/species/chiloscyllium/chiloscyllium_parameters.cfg.orig1
810 2022-09-23 19:06 config/species/chiloscyllium/chiloscyllium_weightmatrix.txt
2022-09-23 19:06 config/species/chlamy2011/
224245 2022-09-23 19:06 config/species/chlamy2011/chlamy2011_exon_probs.pbl
32527 2022-09-23 19:06 config/species/chlamy2011/chlamy2011_igenic_probs.pbl
336945 2022-09-23 19:06 config/species/chlamy2011/chlamy2011_intron_probs.pbl
2057 2022-09-23 19:06 config/species/chlamy2011/chlamy2011_metapars.cfg
1355 2022-09-23 19:06 config/species/chlamy2011/chlamy2011_metapars.utr.cfg
7154 2022-09-23 19:06 config/species/chlamy2011/chlamy2011_parameters.cfg
9052 2022-09-23 19:06 config/species/chlamy2011/chlamy2011_trans_shadow_partial.pbl
14434 2022-09-23 19:06 config/species/chlamy2011/chlamy2011_trans_shadow_partial_utr.pbl
47666 2022-09-23 19:06 config/species/chlamy2011/chlamy2011_utr_probs.pbl
810 2022-09-23 19:06 config/species/chlamy2011/chlamy2011_weightmatrix.txt
2022-09-23 19:06 config/species/chlamydomonas/
318496 2022-09-23 19:06 config/species/chlamydomonas/chlamydomonas_exon_probs.pbl
46118 2022-09-23 19:06 config/species/chlamydomonas/chlamydomonas_igenic_probs.pbl
347533 2022-09-23 19:06 config/species/chlamydomonas/chlamydomonas_intron_probs.pbl
2348 2022-09-23 19:06 config/species/chlamydomonas/chlamydomonas_metapars.cfg
6959 2022-09-23 19:06 config/species/chlamydomonas/chlamydomonas_parameters.cfg
9052 2022-09-23 19:06 config/species/chlamydomonas/chlamydomonas_trans_shadow_partial.pbl
14414 2022-09-23 19:06 config/species/chlamydomonas/chlamydomonas_trans_shadow_partial_utr.pbl
46487 2022-09-23 19:06 config/species/chlamydomonas/chlamydomonas_utr_probs.pbl
810 2022-09-23 19:06 config/species/chlamydomonas/chlamydomonas_weightmatrix.txt
2022-09-23 19:06 config/species/chlorella/
340683 2022-09-23 19:06 config/species/chlorella/chlorella_exon_probs.pbl
44208 2022-09-23 19:06 config/species/chlorella/chlorella_igenic_probs.pbl
139655 2022-09-23 19:06 config/species/chlorella/chlorella_intron_probs.pbl
2057 2022-09-23 19:06 config/species/chlorella/chlorella_metapars.cfg
1355 2022-09-23 19:06 config/species/chlorella/chlorella_metapars.utr.cfg
6837 2022-09-23 19:06 config/species/chlorella/chlorella_parameters.cfg
116709 2022-09-23 19:06 config/species/chlorella/chlorella_utr_probs.pbl
810 2022-09-23 19:06 config/species/chlorella/chlorella_weightmatrix.txt
2022-09-23 19:06 config/species/ciona/
665 2022-09-23 19:06 config/species/ciona/README.TXT
232373 2022-09-23 19:06 config/species/ciona/ciona_exon_probs.pbl
32601 2022-09-23 19:06 config/species/ciona/ciona_igenic_probs.pbl
61182 2022-09-23 19:06 config/species/ciona/ciona_intron_probs.pbl
2057 2022-09-23 19:06 config/species/ciona/ciona_metapars.cfg
1125 2022-09-23 19:06 config/species/ciona/ciona_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/ciona/ciona_metapars.utr.cfg
7212 2022-09-23 19:06 config/species/ciona/ciona_parameters.cfg
7182 2022-09-23 19:06 config/species/ciona/ciona_parameters.cfg.orig1
810 2022-09-23 19:06 config/species/ciona/ciona_weightmatrix.txt
2022-09-23 19:06 config/species/coccidioides_immitis/
1170842 2022-09-23 19:06 config/species/coccidioides_immitis/coccidioides_immitis_exon_probs.pbl
184258 2022-09-23 19:06 config/species/coccidioides_immitis/coccidioides_immitis_igenic_probs.pbl
573179 2022-09-23 19:06 config/species/coccidioides_immitis/coccidioides_immitis_intron_probs.pbl
1860 2022-09-23 19:06 config/species/coccidioides_immitis/coccidioides_immitis_metapars.cfg
6829 2022-09-23 19:06 config/species/coccidioides_immitis/coccidioides_immitis_parameters.cfg
810 2022-09-23 19:06 config/species/coccidioides_immitis/coccidioides_immitis_weightmatrix.txt
2022-09-23 19:06 config/species/coprinus/
1002257 2022-09-23 19:06 config/species/coprinus/coprinus_exon_probs.pbl
137171 2022-09-23 19:06 config/species/coprinus/coprinus_igenic_probs.pbl
174765 2022-09-23 19:06 config/species/coprinus/coprinus_intron_probs.pbl
4084 2022-09-23 19:06 config/species/coprinus/coprinus_parameters.cfg
800 2022-09-23 19:06 config/species/coprinus/coprinus_weightmatrix.txt
2022-09-23 19:06 config/species/coprinus_cinereus/
372030 2022-09-23 19:06 config/species/coprinus_cinereus/coprinus_cinereus_exon_probs.pbl
46741 2022-09-23 19:06 config/species/coprinus_cinereus/coprinus_cinereus_igenic_probs.pbl
82381 2022-09-23 19:06 config/species/coprinus_cinereus/coprinus_cinereus_intron_probs.pbl
1860 2022-09-23 19:06 config/species/coprinus_cinereus/coprinus_cinereus_metapars.cfg
6798 2022-09-23 19:06 config/species/coprinus_cinereus/coprinus_cinereus_parameters.cfg
810 2022-09-23 19:06 config/species/coprinus_cinereus/coprinus_cinereus_weightmatrix.txt
2022-09-23 19:06 config/species/coyote_tobacco/
258156 2022-09-23 19:06 config/species/coyote_tobacco/coyote_tobacco_exon_probs.pbl
32522 2022-09-23 19:06 config/species/coyote_tobacco/coyote_tobacco_igenic_probs.pbl
139708 2022-09-23 19:06 config/species/coyote_tobacco/coyote_tobacco_intron_probs.pbl
2057 2022-09-23 19:06 config/species/coyote_tobacco/coyote_tobacco_metapars.cfg
1355 2022-09-23 19:06 config/species/coyote_tobacco/coyote_tobacco_metapars.utr.cfg
7367 2022-09-23 19:06 config/species/coyote_tobacco/coyote_tobacco_parameters.cfg
14422 2022-09-23 19:06 config/species/coyote_tobacco/coyote_tobacco_trans_shadow_partial_utr.pbl
77768 2022-09-23 19:06 config/species/coyote_tobacco/coyote_tobacco_utr_probs.pbl
810 2022-09-23 19:06 config/species/coyote_tobacco/coyote_tobacco_weightmatrix.txt
2022-09-23 19:06 config/species/cryptococcus/
1013389 2022-09-23 19:06 config/species/cryptococcus/cryptococcus_exon_probs.pbl
137512 2022-09-23 19:06 config/species/cryptococcus/cryptococcus_igenic_probs.pbl
174976 2022-09-23 19:06 config/species/cryptococcus/cryptococcus_intron_probs.pbl
4173 2022-09-23 19:06 config/species/cryptococcus/cryptococcus_parameters.cfg
800 2022-09-23 19:06 config/species/cryptococcus/cryptococcus_weightmatrix.txt
2022-09-23 19:06 config/species/cryptococcus_neoformans_gattii/
330409 2022-09-23 19:06 config/species/cryptococcus_neoformans_gattii/cryptococcus_neoformans_gattii_exon_probs.pbl
45880 2022-09-23 19:06 config/species/cryptococcus_neoformans_gattii/cryptococcus_neoformans_gattii_igenic_probs.pbl
138017 2022-09-23 19:06 config/species/cryptococcus_neoformans_gattii/cryptococcus_neoformans_gattii_intron_probs.pbl
1860 2022-09-23 19:06 config/species/cryptococcus_neoformans_gattii/cryptococcus_neoformans_gattii_metapars.cfg
6932 2022-09-23 19:06 config/species/cryptococcus_neoformans_gattii/cryptococcus_neoformans_gattii_parameters.cfg
810 2022-09-23 19:06 config/species/cryptococcus_neoformans_gattii/cryptococcus_neoformans_gattii_weightmatrix.txt
2022-09-23 19:06 config/species/cryptococcus_neoformans_neoformans_B/
887439 2022-09-23 19:06 config/species/cryptococcus_neoformans_neoformans_B/cryptococcus_neoformans_neoformans_B_exon_probs.pbl
137118 2022-09-23 19:06 config/species/cryptococcus_neoformans_neoformans_B/cryptococcus_neoformans_neoformans_B_igenic_probs.pbl
474916 2022-09-23 19:06 config/species/cryptococcus_neoformans_neoformans_B/cryptococcus_neoformans_neoformans_B_intron_probs.pbl
1860 2022-09-23 19:06 config/species/cryptococcus_neoformans_neoformans_B/cryptococcus_neoformans_neoformans_B_metapars.cfg
6999 2022-09-23 19:06 config/species/cryptococcus_neoformans_neoformans_B/cryptococcus_neoformans_neoformans_B_parameters.cfg
810 2022-09-23 19:06 config/species/cryptococcus_neoformans_neoformans_B/cryptococcus_neoformans_neoformans_B_weightmatrix.txt
2022-09-23 19:06 config/species/cryptococcus_neoformans_neoformans_JEC21/
340093 2022-09-23 19:06 config/species/cryptococcus_neoformans_neoformans_JEC21/cryptococcus_neoformans_neoformans_JEC21_exon_probs.pbl
45849 2022-09-23 19:06 config/species/cryptococcus_neoformans_neoformans_JEC21/cryptococcus_neoformans_neoformans_JEC21_igenic_probs.pbl
346426 2022-09-23 19:06 config/species/cryptococcus_neoformans_neoformans_JEC21/cryptococcus_neoformans_neoformans_JEC21_intron_probs.pbl
1860 2022-09-23 19:06 config/species/cryptococcus_neoformans_neoformans_JEC21/cryptococcus_neoformans_neoformans_JEC21_metapars.cfg
7043 2022-09-23 19:06 config/species/cryptococcus_neoformans_neoformans_JEC21/cryptococcus_neoformans_neoformans_JEC21_parameters.cfg
810 2022-09-23 19:06 config/species/cryptococcus_neoformans_neoformans_JEC21/cryptococcus_neoformans_neoformans_JEC21_weightmatrix.txt
2022-09-23 19:06 config/species/culex/
320621 2022-09-23 19:06 config/species/culex/culex_exon_probs.pbl
277027 2022-09-23 19:06 config/species/culex/culex_exon_probs.pbl.wech
45375 2022-09-23 19:06 config/species/culex/culex_igenic_probs.pbl
44833 2022-09-23 19:06 config/species/culex/culex_igenic_probs.pbl.wech
150702 2022-09-23 19:06 config/species/culex/culex_intron_probs.pbl
129169 2022-09-23 19:06 config/species/culex/culex_intron_probs.pbl.wech
1860 2022-09-23 19:06 config/species/culex/culex_metapars.cfg
6601 2022-09-23 19:06 config/species/culex/culex_parameters.cfg
6603 2022-09-23 19:06 config/species/culex/culex_parameters.old.cfg
12811 2022-09-23 19:06 config/species/culex/culex_trans_shadow_partial_utr.pbl
45964 2022-09-23 19:06 config/species/culex/culex_utr_probs.pbl
810 2022-09-23 19:06 config/species/culex/culex_weightmatrix.txt
2022-09-23 19:06 config/species/debaryomyces_hansenii/
340255 2022-09-23 19:06 config/species/debaryomyces_hansenii/debaryomyces_hansenii_exon_probs.pbl
45079 2022-09-23 19:06 config/species/debaryomyces_hansenii/debaryomyces_hansenii_igenic_probs.pbl
334067 2022-09-23 19:06 config/species/debaryomyces_hansenii/debaryomyces_hansenii_intron_probs.pbl
1860 2022-09-23 19:06 config/species/debaryomyces_hansenii/debaryomyces_hansenii_metapars.cfg
6837 2022-09-23 19:06 config/species/debaryomyces_hansenii/debaryomyces_hansenii_parameters.cfg
810 2022-09-23 19:06 config/species/debaryomyces_hansenii/debaryomyces_hansenii_weightmatrix.txt
2022-09-23 19:06 config/species/elephant_shark/
1203706 2022-09-23 19:06 config/species/elephant_shark/elephant_shark_exon_probs.pbl
215393 2022-09-23 19:06 config/species/elephant_shark/elephant_shark_igenic_probs.pbl
213390 2022-09-23 19:06 config/species/elephant_shark/elephant_shark_intron_probs.pbl
2057 2022-09-23 19:06 config/species/elephant_shark/elephant_shark_metapars.cfg
1355 2022-09-23 19:06 config/species/elephant_shark/elephant_shark_metapars.utr.cfg
7410 2022-09-23 19:06 config/species/elephant_shark/elephant_shark_parameters.cfg
810 2022-09-23 19:06 config/species/elephant_shark/elephant_shark_weightmatrix.txt
2022-09-23 19:06 config/species/encephalitozoon_cuniculi_GB/
313140 2022-09-23 19:06 config/species/encephalitozoon_cuniculi_GB/encephalitozoon_cuniculi_GB_exon_probs.pbl
44451 2022-09-23 19:06 config/species/encephalitozoon_cuniculi_GB/encephalitozoon_cuniculi_GB_igenic_probs.pbl
44196 2022-09-23 19:06 config/species/encephalitozoon_cuniculi_GB/encephalitozoon_cuniculi_GB_intron_probs.pbl
1860 2022-09-23 19:06 config/species/encephalitozoon_cuniculi_GB/encephalitozoon_cuniculi_GB_metapars.cfg
6902 2022-09-23 19:06 config/species/encephalitozoon_cuniculi_GB/encephalitozoon_cuniculi_GB_parameters.cfg
810 2022-09-23 19:06 config/species/encephalitozoon_cuniculi_GB/encephalitozoon_cuniculi_GB_weightmatrix.txt
2022-09-23 19:06 config/species/eremothecium_gossypii/
328071 2022-09-23 19:06 config/species/eremothecium_gossypii/eremothecium_gossypii_exon_probs.pbl
45861 2022-09-23 19:06 config/species/eremothecium_gossypii/eremothecium_gossypii_igenic_probs.pbl
104545 2022-09-23 19:06 config/species/eremothecium_gossypii/eremothecium_gossypii_intron_probs.pbl
1860 2022-09-23 19:06 config/species/eremothecium_gossypii/eremothecium_gossypii_metapars.cfg
6835 2022-09-23 19:06 config/species/eremothecium_gossypii/eremothecium_gossypii_parameters.cfg
810 2022-09-23 19:06 config/species/eremothecium_gossypii/eremothecium_gossypii_weightmatrix.txt
2022-09-23 19:06 config/species/fly/
374872 2022-09-23 19:06 config/species/fly/fly_exon_probs.pbl
45986 2022-09-23 19:06 config/species/fly/fly_igenic_probs.pbl
320107 2022-09-23 19:06 config/species/fly/fly_intron_probs.pbl
2057 2022-09-23 19:06 config/species/fly/fly_metapars.cfg
1355 2022-09-23 19:06 config/species/fly/fly_metapars.utr.cfg
7114 2022-09-23 19:06 config/species/fly/fly_parameters.cfg
121852 2022-09-23 19:06 config/species/fly/fly_utr_probs.pbl
810 2022-09-23 19:06 config/species/fly/fly_weightmatrix.txt
2022-09-23 19:06 config/species/fly_exp/
374872 2022-09-23 19:06 config/species/fly_exp/fly_exp_exon_probs.pbl
45986 2022-09-23 19:06 config/species/fly_exp/fly_exp_igenic_probs.pbl
320107 2022-09-23 19:06 config/species/fly_exp/fly_exp_intron_probs.pbl
1355 2022-09-23 19:06 config/species/fly_exp/fly_exp_metapars.cfg
1356 2022-09-23 19:06 config/species/fly_exp/fly_exp_metapars.utr.cfg
7150 2022-09-23 19:06 config/species/fly_exp/fly_exp_parameters.cfg
121852 2022-09-23 19:06 config/species/fly_exp/fly_exp_utr_probs.pbl
810 2022-09-23 19:06 config/species/fly_exp/fly_exp_weightmatrix.txt
2022-09-23 19:06 config/species/fusarium/
1013504 2022-09-23 19:06 config/species/fusarium/fusarium_exon_probs.pbl
140141 2022-09-23 19:06 config/species/fusarium/fusarium_igenic_probs.pbl
176910 2022-09-23 19:06 config/species/fusarium/fusarium_intron_probs.pbl
4093 2022-09-23 19:06 config/species/fusarium/fusarium_parameters.cfg
800 2022-09-23 19:06 config/species/fusarium/fusarium_weightmatrix.txt
2022-09-23 19:06 config/species/fusarium_graminearum/
931905 2022-09-23 19:06 config/species/fusarium_graminearum/fusarium_graminearum_exon_probs.pbl
138810 2022-09-23 19:06 config/species/fusarium_graminearum/fusarium_graminearum_igenic_probs.pbl
188145 2022-09-23 19:06 config/species/fusarium_graminearum/fusarium_graminearum_intron_probs.pbl
1860 2022-09-23 19:06 config/species/fusarium_graminearum/fusarium_graminearum_metapars.cfg
6826 2022-09-23 19:06 config/species/fusarium_graminearum/fusarium_graminearum_parameters.cfg
810 2022-09-23 19:06 config/species/fusarium_graminearum/fusarium_graminearum_weightmatrix.txt
2022-09-23 19:06 config/species/galdieria/
9786 2022-09-23 19:06 config/species/galdieria/extrinsic.PE.cfg
342186 2022-09-23 19:06 config/species/galdieria/galdieria_exon_probs.pbl
44584 2022-09-23 19:06 config/species/galdieria/galdieria_igenic_probs.pbl
46612 2022-09-23 19:06 config/species/galdieria/galdieria_intron_probs.pbl
2206 2022-09-23 19:06 config/species/galdieria/galdieria_metapars.cfg
6195 2022-09-23 19:06 config/species/galdieria/galdieria_parameters.cfg
97783 2022-09-23 19:06 config/species/galdieria/galdieria_splicefile
14404 2022-09-23 19:06 config/species/galdieria/galdieria_trans_shadow_partial_utr.pbl
28836 2022-09-23 19:06 config/species/galdieria/galdieria_utr_probs.pbl
805 2022-09-23 19:06 config/species/galdieria/galdieria_weightmatrix.txt
2022-09-23 19:06 config/species/generic/
2057 2022-09-23 19:06 config/species/generic/generic_metapars.cfg
1125 2022-09-23 19:06 config/species/generic/generic_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/generic/generic_metapars.utr.cfg
7241 2022-09-23 19:06 config/species/generic/generic_parameters.cfg
810 2022-09-23 19:06 config/species/generic/generic_weightmatrix.txt
2022-09-23 19:06 config/species/gigaspora_margarita/
839 2022-09-23 19:06 config/species/gigaspora_margarita/README.TXT
240640 2022-09-23 19:06 config/species/gigaspora_margarita/gigaspora_margarita_exon_probs.pbl
32748 2022-09-23 19:06 config/species/gigaspora_margarita/gigaspora_margarita_igenic_probs.pbl
97722 2022-09-23 19:06 config/species/gigaspora_margarita/gigaspora_margarita_intron_probs.pbl
2057 2022-09-23 19:06 config/species/gigaspora_margarita/gigaspora_margarita_metapars.cfg
1125 2022-09-23 19:06 config/species/gigaspora_margarita/gigaspora_margarita_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/gigaspora_margarita/gigaspora_margarita_metapars.utr.cfg
7337 2022-09-23 19:06 config/species/gigaspora_margarita/gigaspora_margarita_parameters.cfg
810 2022-09-23 19:06 config/species/gigaspora_margarita/gigaspora_margarita_weightmatrix.txt
2721 2022-09-23 19:06 config/species/gigaspora_margarita/gth.cfg
2022-09-23 19:06 config/species/heliconius_melpomene1/
235167 2022-09-23 19:06 config/species/heliconius_melpomene1/heliconius_melpomene1_exon_probs.pbl
32667 2022-09-23 19:06 config/species/heliconius_melpomene1/heliconius_melpomene1_igenic_probs.pbl
107698 2022-09-23 19:06 config/species/heliconius_melpomene1/heliconius_melpomene1_intron_probs.pbl
2057 2022-09-23 19:06 config/species/heliconius_melpomene1/heliconius_melpomene1_metapars.cfg
1355 2022-09-23 19:06 config/species/heliconius_melpomene1/heliconius_melpomene1_metapars.utr.cfg
7361 2022-09-23 19:06 config/species/heliconius_melpomene1/heliconius_melpomene1_parameters.cfg
810 2022-09-23 19:06 config/species/heliconius_melpomene1/heliconius_melpomene1_weightmatrix.txt
2022-09-23 19:06 config/species/histoplasma/
1016751 2022-09-23 19:06 config/species/histoplasma/histoplasma_exon_probs.pbl
141051 2022-09-23 19:06 config/species/histoplasma/histoplasma_igenic_probs.pbl
177109 2022-09-23 19:06 config/species/histoplasma/histoplasma_intron_probs.pbl
4119 2022-09-23 19:06 config/species/histoplasma/histoplasma_parameters.cfg
800 2022-09-23 19:06 config/species/histoplasma/histoplasma_weightmatrix.txt
2022-09-23 19:06 config/species/histoplasma_capsulatum/
331334 2022-09-23 19:06 config/species/histoplasma_capsulatum/histoplasma_capsulatum_exon_probs.pbl
46251 2022-09-23 19:06 config/species/histoplasma_capsulatum/histoplasma_capsulatum_igenic_probs.pbl
136927 2022-09-23 19:06 config/species/histoplasma_capsulatum/histoplasma_capsulatum_intron_probs.pbl
1860 2022-09-23 19:06 config/species/histoplasma_capsulatum/histoplasma_capsulatum_metapars.cfg
6849 2022-09-23 19:06 config/species/histoplasma_capsulatum/histoplasma_capsulatum_parameters.cfg
810 2022-09-23 19:06 config/species/histoplasma_capsulatum/histoplasma_capsulatum_weightmatrix.txt
2022-09-23 19:06 config/species/honeybee1/
1200299 2022-09-23 19:06 config/species/honeybee1/honeybee1_exon_probs.pbl
222280 2022-09-23 19:06 config/species/honeybee1/honeybee1_exon_probs.pbl.withoutCRF
228755 2022-09-23 19:06 config/species/honeybee1/honeybee1_igenic_probs.pbl
32679 2022-09-23 19:06 config/species/honeybee1/honeybee1_igenic_probs.pbl.withoutCRF
339153 2022-09-23 19:06 config/species/honeybee1/honeybee1_intron_probs.pbl
105391 2022-09-23 19:06 config/species/honeybee1/honeybee1_intron_probs.pbl.withoutCRF
2058 2022-09-23 19:06 config/species/honeybee1/honeybee1_metapars.cfg
1355 2022-09-23 19:06 config/species/honeybee1/honeybee1_metapars.utr.cfg
7244 2022-09-23 19:06 config/species/honeybee1/honeybee1_parameters.cfg
7221 2022-09-23 19:06 config/species/honeybee1/honeybee1_parameters.cfg.orig1
352514 2022-09-23 19:06 config/species/honeybee1/honeybee1_utr_probs.pbl
810 2022-09-23 19:06 config/species/honeybee1/honeybee1_weightmatrix.txt
2022-09-23 19:06 config/species/human/
897 2022-09-23 19:06 config/species/human/README.TXT
503483 2022-09-23 19:06 config/species/human/human_exon_probs.pbl
65030 2022-09-23 19:06 config/species/human/human_igenic_probs.pbl
444544 2022-09-23 19:06 config/species/human/human_intron_probs.pbl
6401 2022-09-23 19:06 config/species/human/human_parameters.cfg
14422 2022-09-23 19:06 config/species/human/human_trans_shadow_partial_utr.pbl
138309 2022-09-23 19:06 config/species/human/human_utr_probs.pbl
806 2022-09-23 19:06 config/species/human/human_weightmatrix.txt
2022-09-23 19:06 config/species/hymenolepis_microstoma/
730434 2022-09-23 19:06 config/species/hymenolepis_microstoma/hymenolepis_microstoma_exon_probs.pbl
130283 2022-09-23 19:06 config/species/hymenolepis_microstoma/hymenolepis_microstoma_igenic_probs.pbl
288790 2022-09-23 19:06 config/species/hymenolepis_microstoma/hymenolepis_microstoma_intron_probs.pbl
2057 2022-09-23 19:06 config/species/hymenolepis_microstoma/hymenolepis_microstoma_metapars.cfg
1125 2022-09-23 19:06 config/species/hymenolepis_microstoma/hymenolepis_microstoma_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/hymenolepis_microstoma/hymenolepis_microstoma_metapars.utr.cfg
7385 2022-09-23 19:06 config/species/hymenolepis_microstoma/hymenolepis_microstoma_parameters.cfg
810 2022-09-23 19:06 config/species/hymenolepis_microstoma/hymenolepis_microstoma_weightmatrix.txt
460 2022-09-23 19:06 config/species/hymenolepis_microstoma/make.doc
2022-09-23 19:06 config/species/japaneselamprey/
737928 2022-09-23 19:06 config/species/japaneselamprey/japaneselamprey_exon_probs.pbl
129990 2022-09-23 19:06 config/species/japaneselamprey/japaneselamprey_igenic_probs.pbl
357776 2022-09-23 19:06 config/species/japaneselamprey/japaneselamprey_intron_probs.pbl
2057 2022-09-23 19:06 config/species/japaneselamprey/japaneselamprey_metapars.cfg
1356 2022-09-23 19:06 config/species/japaneselamprey/japaneselamprey_metapars.utr.cfg
7319 2022-09-23 19:06 config/species/japaneselamprey/japaneselamprey_parameters.cfg
810 2022-09-23 19:06 config/species/japaneselamprey/japaneselamprey_weightmatrix.txt
2022-09-23 19:06 config/species/kluyveromyces_lactis/
336051 2022-09-23 19:06 config/species/kluyveromyces_lactis/kluyveromyces_lactis_exon_probs.pbl
45215 2022-09-23 19:06 config/species/kluyveromyces_lactis/kluyveromyces_lactis_igenic_probs.pbl
116958 2022-09-23 19:06 config/species/kluyveromyces_lactis/kluyveromyces_lactis_intron_probs.pbl
1860 2022-09-23 19:06 config/species/kluyveromyces_lactis/kluyveromyces_lactis_metapars.cfg
6824 2022-09-23 19:06 config/species/kluyveromyces_lactis/kluyveromyces_lactis_parameters.cfg
810 2022-09-23 19:06 config/species/kluyveromyces_lactis/kluyveromyces_lactis_weightmatrix.txt
2022-09-23 19:06 config/species/laccaria_bicolor/
338221 2022-09-23 19:06 config/species/laccaria_bicolor/laccaria_bicolor_exon_probs.pbl
46218 2022-09-23 19:06 config/species/laccaria_bicolor/laccaria_bicolor_igenic_probs.pbl
95859 2022-09-23 19:06 config/species/laccaria_bicolor/laccaria_bicolor_intron_probs.pbl
1860 2022-09-23 19:06 config/species/laccaria_bicolor/laccaria_bicolor_metapars.cfg
6779 2022-09-23 19:06 config/species/laccaria_bicolor/laccaria_bicolor_parameters.cfg
810 2022-09-23 19:06 config/species/laccaria_bicolor/laccaria_bicolor_weightmatrix.txt
2022-09-23 19:06 config/species/leishmania_tarentolae/
286450 2022-09-23 19:06 config/species/leishmania_tarentolae/leishmania_tarentolae_exon_probs.pbl
45248 2022-09-23 19:06 config/species/leishmania_tarentolae/leishmania_tarentolae_igenic_probs.pbl
1351 2022-09-23 19:06 config/species/leishmania_tarentolae/leishmania_tarentolae_metapars.cfg
1355 2022-09-23 19:06 config/species/leishmania_tarentolae/leishmania_tarentolae_metapars.utr.cfg
7176 2022-09-23 19:06 config/species/leishmania_tarentolae/leishmania_tarentolae_parameters.cfg
810 2022-09-23 19:06 config/species/leishmania_tarentolae/leishmania_tarentolae_weightmatrix.txt
2022-09-23 19:06 config/species/lodderomyces_elongisporus/
1134920 2022-09-23 19:06 config/species/lodderomyces_elongisporus/lodderomyces_elongisporus_exon_probs.pbl
182219 2022-09-23 19:06 config/species/lodderomyces_elongisporus/lodderomyces_elongisporus_igenic_probs.pbl
239119 2022-09-23 19:06 config/species/lodderomyces_elongisporus/lodderomyces_elongisporus_intron_probs.pbl
1860 2022-09-23 19:06 config/species/lodderomyces_elongisporus/lodderomyces_elongisporus_metapars.cfg
6876 2022-09-23 19:06 config/species/lodderomyces_elongisporus/lodderomyces_elongisporus_parameters.cfg
810 2022-09-23 19:06 config/species/lodderomyces_elongisporus/lodderomyces_elongisporus_weightmatrix.txt
2022-09-23 19:06 config/species/magnaporthe_grisea/
330470 2022-09-23 19:06 config/species/magnaporthe_grisea/magnaporthe_grisea_exon_probs.pbl
46909 2022-09-23 19:06 config/species/magnaporthe_grisea/magnaporthe_grisea_igenic_probs.pbl
145474 2022-09-23 19:06 config/species/magnaporthe_grisea/magnaporthe_grisea_intron_probs.pbl
1860 2022-09-23 19:06 config/species/magnaporthe_grisea/magnaporthe_grisea_metapars.cfg
6805 2022-09-23 19:06 config/species/magnaporthe_grisea/magnaporthe_grisea_parameters.cfg
810 2022-09-23 19:06 config/species/magnaporthe_grisea/magnaporthe_grisea_weightmatrix.txt
2022-09-23 19:06 config/species/maize/
2566678 2022-09-23 19:06 config/species/maize/maize_exon_probs.pbl
458519 2022-09-23 19:06 config/species/maize/maize_igenic_probs.pbl
828056 2022-09-23 19:06 config/species/maize/maize_intron_probs.pbl
1868 2022-09-23 19:06 config/species/maize/maize_metapars.cfg
4974 2022-09-23 19:06 config/species/maize/maize_parameters.cfg
446295 2022-09-23 19:06 config/species/maize/maize_splicefile.txt.gz
810 2022-09-23 19:06 config/species/maize/maize_weightmatrix.txt
2022-09-23 19:06 config/species/maize5/
585821 2022-09-23 19:06 config/species/maize5/maize5_exon_probs.pbl
97523 2022-09-23 19:06 config/species/maize5/maize5_igenic_probs.pbl
339255 2022-09-23 19:06 config/species/maize5/maize5_intron_probs.pbl
2057 2022-09-23 19:06 config/species/maize5/maize5_metapars.cfg
1355 2022-09-23 19:06 config/species/maize5/maize5_metapars.utr.cfg
7190 2022-09-23 19:06 config/species/maize5/maize5_parameters.cfg
163586 2022-09-23 19:06 config/species/maize5/maize5_utr_probs.pbl
810 2022-09-23 19:06 config/species/maize5/maize5_weightmatrix.txt
2022-09-23 19:06 config/species/mnemiopsis_leidyi/
665 2022-09-23 19:06 config/species/mnemiopsis_leidyi/README.TXT
259099 2022-09-23 19:06 config/species/mnemiopsis_leidyi/mnemiopsis_leidyi_exon_probs.pbl
32562 2022-09-23 19:06 config/species/mnemiopsis_leidyi/mnemiopsis_leidyi_igenic_probs.pbl
351558 2022-09-23 19:06 config/species/mnemiopsis_leidyi/mnemiopsis_leidyi_intron_probs.pbl
2057 2022-09-23 19:06 config/species/mnemiopsis_leidyi/mnemiopsis_leidyi_metapars.cfg
1445 2022-09-23 19:06 config/species/mnemiopsis_leidyi/mnemiopsis_leidyi_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/mnemiopsis_leidyi/mnemiopsis_leidyi_metapars.utr.cfg
7319 2022-09-23 19:06 config/species/mnemiopsis_leidyi/mnemiopsis_leidyi_parameters.cfg
1020 2022-09-23 19:06 config/species/mnemiopsis_leidyi/mnemiopsis_leidyi_parameters.cgp.cfg
70965 2022-09-23 19:06 config/species/mnemiopsis_leidyi/mnemiopsis_leidyi_utr_probs.pbl
810 2022-09-23 19:06 config/species/mnemiopsis_leidyi/mnemiopsis_leidyi_weightmatrix.txt
2022-09-23 19:06 config/species/nasonia/
1351316 2022-09-23 19:06 config/species/nasonia/nasonia_exon_probs.pbl
228786 2022-09-23 19:06 config/species/nasonia/nasonia_igenic_probs.pbl
436120 2022-09-23 19:06 config/species/nasonia/nasonia_intron_probs.pbl
2408 2022-09-23 19:06 config/species/nasonia/nasonia_metapars.cfg
6783 2022-09-23 19:06 config/species/nasonia/nasonia_parameters.cfg
810 2022-09-23 19:06 config/species/nasonia/nasonia_weightmatrix.txt
2022-09-23 19:06 config/species/nematostella_vectensis/
1933 2022-09-23 19:06 config/species/nematostella_vectensis/README.TXT
228294 2022-09-23 19:06 config/species/nematostella_vectensis/nematostella_vectensis_exon_probs.pbl
32556 2022-09-23 19:06 config/species/nematostella_vectensis/nematostella_vectensis_igenic_probs.pbl
297680 2022-09-23 19:06 config/species/nematostella_vectensis/nematostella_vectensis_intron_probs.pbl
7371 2022-09-23 19:06 config/species/nematostella_vectensis/nematostella_vectensis_parameters.cfg
810 2022-09-23 19:06 config/species/nematostella_vectensis/nematostella_vectensis_weightmatrix.txt
2022-09-23 19:06 config/species/neurospora/
998409 2022-09-23 19:06 config/species/neurospora/neurospora_exon_probs.pbl
140376 2022-09-23 19:06 config/species/neurospora/neurospora_igenic_probs.pbl
175535 2022-09-23 19:06 config/species/neurospora/neurospora_intron_probs.pbl
4133 2022-09-23 19:06 config/species/neurospora/neurospora_parameters.cfg
800 2022-09-23 19:06 config/species/neurospora/neurospora_weightmatrix.txt
2022-09-23 19:06 config/species/neurospora_crassa/
1498946 2022-09-23 19:06 config/species/neurospora_crassa/neurospora_crassa_exon_probs.pbl
231310 2022-09-23 19:06 config/species/neurospora_crassa/neurospora_crassa_igenic_probs.pbl
486954 2022-09-23 19:06 config/species/neurospora_crassa/neurospora_crassa_intron_probs.pbl
1860 2022-09-23 19:06 config/species/neurospora_crassa/neurospora_crassa_metapars.cfg
6787 2022-09-23 19:06 config/species/neurospora_crassa/neurospora_crassa_parameters.cfg
810 2022-09-23 19:06 config/species/neurospora_crassa/neurospora_crassa_weightmatrix.txt
2022-09-23 19:06 config/species/parasteatoda/
235614 2022-09-23 19:06 config/species/parasteatoda/parasteatoda_exon_probs.pbl
32698 2022-09-23 19:06 config/species/parasteatoda/parasteatoda_igenic_probs.pbl
69546 2022-09-23 19:06 config/species/parasteatoda/parasteatoda_intron_probs.pbl
7267 2022-09-23 19:06 config/species/parasteatoda/parasteatoda_parameters.cfg
86927 2022-09-23 19:06 config/species/parasteatoda/parasteatoda_utr_probs.pbl
810 2022-09-23 19:06 config/species/parasteatoda/parasteatoda_weightmatrix.txt
2022-09-23 19:06 config/species/pchrysosporium/
982154 2022-09-23 19:06 config/species/pchrysosporium/pchrysosporium_exon_probs.pbl
139017 2022-09-23 19:06 config/species/pchrysosporium/pchrysosporium_igenic_probs.pbl
173051 2022-09-23 19:06 config/species/pchrysosporium/pchrysosporium_intron_probs.pbl
4164 2022-09-23 19:06 config/species/pchrysosporium/pchrysosporium_parameters.cfg
800 2022-09-23 19:06 config/species/pchrysosporium/pchrysosporium_weightmatrix.txt
2022-09-23 19:06 config/species/pea_aphid/
349150 2022-09-23 19:06 config/species/pea_aphid/pea_aphid_exon_probs.pbl
45971 2022-09-23 19:06 config/species/pea_aphid/pea_aphid_igenic_probs.pbl
96320 2022-09-23 19:06 config/species/pea_aphid/pea_aphid_intron_probs.pbl
2510 2022-09-23 19:06 config/species/pea_aphid/pea_aphid_metapars.cfg
6841 2022-09-23 19:06 config/species/pea_aphid/pea_aphid_parameters.cfg
14418 2022-09-23 19:06 config/species/pea_aphid/pea_aphid_trans_shadow_partial_utr.pbl
95366 2022-09-23 19:06 config/species/pea_aphid/pea_aphid_utr_probs.pbl
810 2022-09-23 19:06 config/species/pea_aphid/pea_aphid_weightmatrix.txt
2022-09-23 19:06 config/species/pfalciparum/
1125341 2022-09-23 19:06 config/species/pfalciparum/pfalciparum_exon_probs.pbl
189685 2022-09-23 19:06 config/species/pfalciparum/pfalciparum_igenic_probs.pbl
254415 2022-09-23 19:06 config/species/pfalciparum/pfalciparum_intron_probs.pbl
1862 2022-09-23 19:06 config/species/pfalciparum/pfalciparum_metapars.cfg
5394 2022-09-23 19:06 config/species/pfalciparum/pfalciparum_parameters.cfg
9043 2022-09-23 19:06 config/species/pfalciparum/pfalciparum_trans_shadow_partial.pbl
810 2022-09-23 19:06 config/species/pfalciparum/pfalciparum_weightmatrix.txt
2022-09-23 19:06 config/species/phanerochaete_chrysosporium/
956901 2022-09-23 19:06 config/species/phanerochaete_chrysosporium/phanerochaete_chrysosporium_exon_probs.pbl
137469 2022-09-23 19:06 config/species/phanerochaete_chrysosporium/phanerochaete_chrysosporium_igenic_probs.pbl
582731 2022-09-23 19:06 config/species/phanerochaete_chrysosporium/phanerochaete_chrysosporium_intron_probs.pbl
1860 2022-09-23 19:06 config/species/phanerochaete_chrysosporium/phanerochaete_chrysosporium_metapars.cfg
6902 2022-09-23 19:06 config/species/phanerochaete_chrysosporium/phanerochaete_chrysosporium_parameters.cfg
810 2022-09-23 19:06 config/species/phanerochaete_chrysosporium/phanerochaete_chrysosporium_weightmatrix.txt
2022-09-23 19:06 config/species/pichia_stipitis/
568444 2022-09-23 19:06 config/species/pichia_stipitis/pichia_stipitis_exon_probs.pbl
90948 2022-09-23 19:06 config/species/pichia_stipitis/pichia_stipitis_igenic_probs.pbl
455573 2022-09-23 19:06 config/species/pichia_stipitis/pichia_stipitis_intron_probs.pbl
1860 2022-09-23 19:06 config/species/pichia_stipitis/pichia_stipitis_metapars.cfg
6766 2022-09-23 19:06 config/species/pichia_stipitis/pichia_stipitis_parameters.cfg
810 2022-09-23 19:06 config/species/pichia_stipitis/pichia_stipitis_weightmatrix.txt
2022-09-23 19:06 config/species/pisaster/
3722 2022-09-23 19:06 config/species/pisaster/extrinsic.pisaster.cfg
230017 2022-09-23 19:06 config/species/pisaster/pisaster_exon_probs.pbl
32530 2022-09-23 19:06 config/species/pisaster/pisaster_igenic_probs.pbl
74059 2022-09-23 19:06 config/species/pisaster/pisaster_intron_probs.pbl
2057 2022-09-23 19:06 config/species/pisaster/pisaster_metapars.cfg
1125 2022-09-23 19:06 config/species/pisaster/pisaster_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/pisaster/pisaster_metapars.utr.cfg
7253 2022-09-23 19:06 config/species/pisaster/pisaster_parameters.cfg
810 2022-09-23 19:06 config/species/pisaster/pisaster_weightmatrix.txt
2022-09-23 19:06 config/species/pneumocystis/
772 2022-09-23 19:06 config/species/pneumocystis/README.TXT
1297255 2022-09-23 19:06 config/species/pneumocystis/pneumocystis_exon_probs.pbl
224942 2022-09-23 19:06 config/species/pneumocystis/pneumocystis_igenic_probs.pbl
245690 2022-09-23 19:06 config/species/pneumocystis/pneumocystis_intron_probs.pbl
1857 2022-09-23 19:06 config/species/pneumocystis/pneumocystis_metapars.cfg
1860 2022-09-23 19:06 config/species/pneumocystis/pneumocystis_metaparsBAK.cfg
6726 2022-09-23 19:06 config/species/pneumocystis/pneumocystis_parameters.cfg
810 2022-09-23 19:06 config/species/pneumocystis/pneumocystis_weightmatrix.txt
2022-09-23 19:06 config/species/rhincodon/
239450 2022-09-23 19:06 config/species/rhincodon/rhincodon_exon_probs.pbl
32458 2022-09-23 19:06 config/species/rhincodon/rhincodon_igenic_probs.pbl
107961 2022-09-23 19:06 config/species/rhincodon/rhincodon_intron_probs.pbl
2057 2022-09-23 19:06 config/species/rhincodon/rhincodon_metapars.cfg
1125 2022-09-23 19:06 config/species/rhincodon/rhincodon_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/rhincodon/rhincodon_metapars.utr.cfg
7282 2022-09-23 19:06 config/species/rhincodon/rhincodon_parameters.cfg
7237 2022-09-23 19:06 config/species/rhincodon/rhincodon_parameters.cfg.orig1
810 2022-09-23 19:06 config/species/rhincodon/rhincodon_weightmatrix.txt
2022-09-23 19:06 config/species/rhizopus_oryzae/
344815 2022-09-23 19:06 config/species/rhizopus_oryzae/rhizopus_oryzae_exon_probs.pbl
45862 2022-09-23 19:06 config/species/rhizopus_oryzae/rhizopus_oryzae_igenic_probs.pbl
145606 2022-09-23 19:06 config/species/rhizopus_oryzae/rhizopus_oryzae_intron_probs.pbl
1860 2022-09-23 19:06 config/species/rhizopus_oryzae/rhizopus_oryzae_metapars.cfg
6768 2022-09-23 19:06 config/species/rhizopus_oryzae/rhizopus_oryzae_parameters.cfg
810 2022-09-23 19:06 config/species/rhizopus_oryzae/rhizopus_oryzae_weightmatrix.txt
2022-09-23 19:06 config/species/rhodnius/
238206 2022-09-23 19:06 config/species/rhodnius/rhodnius_exon_probs.pbl
32629 2022-09-23 19:06 config/species/rhodnius/rhodnius_igenic_probs.pbl
174205 2022-09-23 19:06 config/species/rhodnius/rhodnius_intron_probs.pbl
2057 2022-09-23 19:06 config/species/rhodnius/rhodnius_metapars.cfg
1355 2022-09-23 19:06 config/species/rhodnius/rhodnius_metapars.utr.cfg
7231 2022-09-23 19:06 config/species/rhodnius/rhodnius_parameters.cfg
83840 2022-09-23 19:06 config/species/rhodnius/rhodnius_utr_probs.pbl
810 2022-09-23 19:06 config/species/rhodnius/rhodnius_weightmatrix.txt
2022-09-23 19:06 config/species/rice/
2746 2022-09-23 19:06 config/species/rice/README.TXT
762253 2022-09-23 19:06 config/species/rice/rice_exon_probs.pbl
130164 2022-09-23 19:06 config/species/rice/rice_igenic_probs.pbl
444825 2022-09-23 19:06 config/species/rice/rice_intron_probs.pbl
2057 2022-09-23 19:06 config/species/rice/rice_metapars.cfg
1355 2022-09-23 19:06 config/species/rice/rice_metapars.utr.cfg
7198 2022-09-23 19:06 config/species/rice/rice_parameters.cfg
218537 2022-09-23 19:06 config/species/rice/rice_utr_probs.pbl
810 2022-09-23 19:06 config/species/rice/rice_weightmatrix.txt
2022-09-23 19:06 config/species/s_aureus/
252 2022-09-23 19:06 config/species/s_aureus/README.TXT
386845 2022-09-23 19:06 config/species/s_aureus/s_aureus_exon_probs.pbl
38884 2022-09-23 19:06 config/species/s_aureus/s_aureus_igenic_probs.pbl
1517 2022-09-23 19:06 config/species/s_aureus/s_aureus_metapars.cfg
1355 2022-09-23 19:06 config/species/s_aureus/s_aureus_metapars.utr.cfg
2400 2022-09-23 19:06 config/species/s_aureus/s_aureus_ovlp_len.pbl
7551 2022-09-23 19:06 config/species/s_aureus/s_aureus_parameters.cfg
3030 2022-09-23 19:06 config/species/s_aureus/s_aureus_parameters.cgp.cfg
1403 2022-09-23 19:06 config/species/s_aureus/s_aureus_trans_shadow_bacterium.pbl
810 2022-09-23 19:06 config/species/s_aureus/s_aureus_weightmatrix.txt
2022-09-23 19:06 config/species/s_pneumoniae/
874203 2022-09-23 19:06 config/species/s_pneumoniae/s_pneumoniae_exon_probs.pbl
96519 2022-09-23 19:06 config/species/s_pneumoniae/s_pneumoniae_igenic_probs.pbl
1520 2022-09-23 19:06 config/species/s_pneumoniae/s_pneumoniae_metapars.cfg
1355 2022-09-23 19:06 config/species/s_pneumoniae/s_pneumoniae_metapars.utr.cfg
2400 2022-09-23 19:06 config/species/s_pneumoniae/s_pneumoniae_ovlp_len.pbl
7561 2022-09-23 19:06 config/species/s_pneumoniae/s_pneumoniae_parameters.cfg
7564 2022-09-23 19:06 config/species/s_pneumoniae/s_pneumoniae_parameters.cfg.orig1
7564 2022-09-23 19:06 config/species/s_pneumoniae/s_pneumoniae_parameters.cfg.orig2
7562 2022-09-23 19:06 config/species/s_pneumoniae/s_pneumoniae_parameters.cfg.orig3
7565 2022-09-23 19:06 config/species/s_pneumoniae/s_pneumoniae_parameters.cfg.orig4
1403 2022-09-23 19:06 config/species/s_pneumoniae/s_pneumoniae_trans_shadow_bacterium.pbl
810 2022-09-23 19:06 config/species/s_pneumoniae/s_pneumoniae_weightmatrix.txt
2022-09-23 19:06 config/species/saccharomyces/
957523 2022-09-23 19:06 config/species/saccharomyces/saccharomyces_exon_probs.pbl
137495 2022-09-23 19:06 config/species/saccharomyces/saccharomyces_igenic_probs.pbl
167726 2022-09-23 19:06 config/species/saccharomyces/saccharomyces_intron_probs.pbl
4155 2022-09-23 19:06 config/species/saccharomyces/saccharomyces_parameters.cfg
800 2022-09-23 19:06 config/species/saccharomyces/saccharomyces_weightmatrix.txt
2022-09-23 19:06 config/species/saccharomyces_cerevisiae_S288C/
348570 2022-09-23 19:06 config/species/saccharomyces_cerevisiae_S288C/saccharomyces_cerevisiae_S288C_exon_probs.pbl
45156 2022-09-23 19:06 config/species/saccharomyces_cerevisiae_S288C/saccharomyces_cerevisiae_S288C_igenic_probs.pbl
106356 2022-09-23 19:06 config/species/saccharomyces_cerevisiae_S288C/saccharomyces_cerevisiae_S288C_intron_probs.pbl
1860 2022-09-23 19:06 config/species/saccharomyces_cerevisiae_S288C/saccharomyces_cerevisiae_S288C_metapars.cfg
6933 2022-09-23 19:06 config/species/saccharomyces_cerevisiae_S288C/saccharomyces_cerevisiae_S288C_parameters.cfg
810 2022-09-23 19:06 config/species/saccharomyces_cerevisiae_S288C/saccharomyces_cerevisiae_S288C_weightmatrix.txt
2022-09-23 19:06 config/species/saccharomyces_cerevisiae_rm11-1a_1/
593726 2022-09-23 19:06 config/species/saccharomyces_cerevisiae_rm11-1a_1/saccharomyces_cerevisiae_rm11-1a_1_exon_probs.pbl
90747 2022-09-23 19:06 config/species/saccharomyces_cerevisiae_rm11-1a_1/saccharomyces_cerevisiae_rm11-1a_1_igenic_probs.pbl
270191 2022-09-23 19:06 config/species/saccharomyces_cerevisiae_rm11-1a_1/saccharomyces_cerevisiae_rm11-1a_1_intron_probs.pbl
1860 2022-09-23 19:06 config/species/saccharomyces_cerevisiae_rm11-1a_1/saccharomyces_cerevisiae_rm11-1a_1_metapars.cfg
6981 2022-09-23 19:06 config/species/saccharomyces_cerevisiae_rm11-1a_1/saccharomyces_cerevisiae_rm11-1a_1_parameters.cfg
810 2022-09-23 19:06 config/species/saccharomyces_cerevisiae_rm11-1a_1/saccharomyces_cerevisiae_rm11-1a_1_weightmatrix.txt
2022-09-23 19:06 config/species/schistosoma/
1333620 2022-09-23 19:06 config/species/schistosoma/schistosoma_exon_probs.pbl
233742 2022-09-23 19:06 config/species/schistosoma/schistosoma_igenic_probs.pbl
419080 2022-09-23 19:06 config/species/schistosoma/schistosoma_intron_probs.pbl
1867 2022-09-23 19:06 config/species/schistosoma/schistosoma_metapars.cfg
4835 2022-09-23 19:06 config/species/schistosoma/schistosoma_parameters.cfg
4393 2022-09-23 19:06 config/species/schistosoma/schistosoma_parameters.cfg.opt
684466 2022-09-23 19:06 config/species/schistosoma/schistosoma_splicefile.txt
810 2022-09-23 19:06 config/species/schistosoma/schistosoma_weightmatrix.txt
2022-09-23 19:06 config/species/schistosoma2/
294 2022-09-23 19:06 config/species/schistosoma2/README.TXT
230093 2022-09-23 19:06 config/species/schistosoma2/schistosoma2_exon_probs.pbl
32516 2022-09-23 19:06 config/species/schistosoma2/schistosoma2_igenic_probs.pbl
309362 2022-09-23 19:06 config/species/schistosoma2/schistosoma2_intron_probs.pbl
2057 2022-09-23 19:06 config/species/schistosoma2/schistosoma2_metapars.cfg
1445 2022-09-23 19:06 config/species/schistosoma2/schistosoma2_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/schistosoma2/schistosoma2_metapars.utr.cfg
7376 2022-09-23 19:06 config/species/schistosoma2/schistosoma2_parameters.cfg
81110 2022-09-23 19:06 config/species/schistosoma2/schistosoma2_utr_probs.pbl
810 2022-09-23 19:06 config/species/schistosoma2/schistosoma2_weightmatrix.txt
2022-09-23 19:06 config/species/schizosaccharomyces_pombe/
318656 2022-09-23 19:06 config/species/schizosaccharomyces_pombe/schizosaccharomyces_pombe_exon_probs.pbl
45204 2022-09-23 19:06 config/species/schizosaccharomyces_pombe/schizosaccharomyces_pombe_igenic_probs.pbl
135537 2022-09-23 19:06 config/species/schizosaccharomyces_pombe/schizosaccharomyces_pombe_intron_probs.pbl
1860 2022-09-23 19:06 config/species/schizosaccharomyces_pombe/schizosaccharomyces_pombe_metapars.cfg
6877 2022-09-23 19:06 config/species/schizosaccharomyces_pombe/schizosaccharomyces_pombe_parameters.cfg
810 2022-09-23 19:06 config/species/schizosaccharomyces_pombe/schizosaccharomyces_pombe_weightmatrix.txt
2022-09-23 19:06 config/species/scyliorhinus/
260907 2022-09-23 19:06 config/species/scyliorhinus/scyliorhinus_exon_probs.pbl
32441 2022-09-23 19:06 config/species/scyliorhinus/scyliorhinus_igenic_probs.pbl
113978 2022-09-23 19:06 config/species/scyliorhinus/scyliorhinus_intron_probs.pbl
2057 2022-09-23 19:06 config/species/scyliorhinus/scyliorhinus_metapars.cfg
1125 2022-09-23 19:06 config/species/scyliorhinus/scyliorhinus_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/scyliorhinus/scyliorhinus_metapars.utr.cfg
7327 2022-09-23 19:06 config/species/scyliorhinus/scyliorhinus_parameters.cfg
7226 2022-09-23 19:06 config/species/scyliorhinus/scyliorhinus_parameters.cfg.orig1
810 2022-09-23 19:06 config/species/scyliorhinus/scyliorhinus_weightmatrix.txt
2022-09-23 19:06 config/species/sealamprey/
328927 2022-09-23 19:06 config/species/sealamprey/sealamprey_exon_probs.pbl
44930 2022-09-23 19:06 config/species/sealamprey/sealamprey_igenic_probs.pbl
77745 2022-09-23 19:06 config/species/sealamprey/sealamprey_intron_probs.pbl
1860 2022-09-23 19:06 config/species/sealamprey/sealamprey_metapars.cfg
6940 2022-09-23 19:06 config/species/sealamprey/sealamprey_parameters.cfg
810 2022-09-23 19:06 config/species/sealamprey/sealamprey_weightmatrix.txt
2022-09-23 19:06 config/species/strongylocentrotus_purpuratus/
1388 2022-09-23 19:06 config/species/strongylocentrotus_purpuratus/README.TXT
255820 2022-09-23 19:06 config/species/strongylocentrotus_purpuratus/strongylocentrotus_purpuratus_exon_probs.pbl
32535 2022-09-23 19:06 config/species/strongylocentrotus_purpuratus/strongylocentrotus_purpuratus_igenic_probs.pbl
357030 2022-09-23 19:06 config/species/strongylocentrotus_purpuratus/strongylocentrotus_purpuratus_intron_probs.pbl
2057 2022-09-23 19:06 config/species/strongylocentrotus_purpuratus/strongylocentrotus_purpuratus_metapars.cfg
1445 2022-09-23 19:06 config/species/strongylocentrotus_purpuratus/strongylocentrotus_purpuratus_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/strongylocentrotus_purpuratus/strongylocentrotus_purpuratus_metapars.utr.cfg
7434 2022-09-23 19:06 config/species/strongylocentrotus_purpuratus/strongylocentrotus_purpuratus_parameters.cfg
1020 2022-09-23 19:06 config/species/strongylocentrotus_purpuratus/strongylocentrotus_purpuratus_parameters.cgp.cfg
70965 2022-09-23 19:06 config/species/strongylocentrotus_purpuratus/strongylocentrotus_purpuratus_utr_probs.pbl
810 2022-09-23 19:06 config/species/strongylocentrotus_purpuratus/strongylocentrotus_purpuratus_weightmatrix.txt
2022-09-23 19:06 config/species/sulfolobus_solfataricus/
201014 2022-09-23 19:06 config/species/sulfolobus_solfataricus/sulfolobus_solfataricus_exon_probs.pbl
84202 2022-09-23 19:06 config/species/sulfolobus_solfataricus/sulfolobus_solfataricus_igenic_probs.pbl
1520 2022-09-23 19:06 config/species/sulfolobus_solfataricus/sulfolobus_solfataricus_metapars.cfg
1355 2022-09-23 19:06 config/species/sulfolobus_solfataricus/sulfolobus_solfataricus_metapars.utr.cfg
2400 2022-09-23 19:06 config/species/sulfolobus_solfataricus/sulfolobus_solfataricus_ovlp_len.pbl
7687 2022-09-23 19:06 config/species/sulfolobus_solfataricus/sulfolobus_solfataricus_parameters.cfg
1403 2022-09-23 19:06 config/species/sulfolobus_solfataricus/sulfolobus_solfataricus_trans_shadow_bacterium.pbl
810 2022-09-23 19:06 config/species/sulfolobus_solfataricus/sulfolobus_solfataricus_weightmatrix.txt
2022-09-23 19:06 config/species/sunflower/
327 2022-09-23 19:06 config/species/sunflower/README.TXT
244628 2022-09-23 19:06 config/species/sunflower/sunflower_exon_probs.pbl
32564 2022-09-23 19:06 config/species/sunflower/sunflower_igenic_probs.pbl
48607 2022-09-23 19:06 config/species/sunflower/sunflower_intron_probs.pbl
2057 2022-09-23 19:06 config/species/sunflower/sunflower_metapars.cfg
1125 2022-09-23 19:06 config/species/sunflower/sunflower_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/sunflower/sunflower_metapars.utr.cfg
7250 2022-09-23 19:06 config/species/sunflower/sunflower_parameters.cfg
810 2022-09-23 19:06 config/species/sunflower/sunflower_weightmatrix.txt
2022-09-23 19:06 config/species/template_prokaryotic/
1521 2022-09-23 19:06 config/species/template_prokaryotic/template_prokaryotic_metapars.cfg
1355 2022-09-23 19:06 config/species/template_prokaryotic/template_prokaryotic_metapars.utr.cfg
2400 2022-09-23 19:06 config/species/template_prokaryotic/template_prokaryotic_ovlp_len.pbl
7651 2022-09-23 19:06 config/species/template_prokaryotic/template_prokaryotic_parameters.cfg
1403 2022-09-23 19:06 config/species/template_prokaryotic/template_prokaryotic_trans_shadow_bacterium.pbl
810 2022-09-23 19:06 config/species/template_prokaryotic/template_prokaryotic_weightmatrix.txt
2022-09-23 19:06 config/species/tetrahymena/
316071 2022-09-23 19:06 config/species/tetrahymena/tetrahymena_exon_probs.pbl
45052 2022-09-23 19:06 config/species/tetrahymena/tetrahymena_igenic_probs.pbl
75647 2022-09-23 19:06 config/species/tetrahymena/tetrahymena_intron_probs.pbl
2015 2022-09-23 19:06 config/species/tetrahymena/tetrahymena_metapars.cfg
5051 2022-09-23 19:06 config/species/tetrahymena/tetrahymena_parameters.cfg
810 2022-09-23 19:06 config/species/tetrahymena/tetrahymena_weightmatrix.txt
2022-09-23 19:06 config/species/thermoanaerobacter_tengcongensis/
198011 2022-09-23 19:06 config/species/thermoanaerobacter_tengcongensis/thermoanaerobacter_tengcongensis_exon_probs.pbl
19275 2022-09-23 19:06 config/species/thermoanaerobacter_tengcongensis/thermoanaerobacter_tengcongensis_igenic_probs.pbl
1521 2022-09-23 19:06 config/species/thermoanaerobacter_tengcongensis/thermoanaerobacter_tengcongensis_metapars.cfg
1355 2022-09-23 19:06 config/species/thermoanaerobacter_tengcongensis/thermoanaerobacter_tengcongensis_metapars.utr.cfg
2400 2022-09-23 19:06 config/species/thermoanaerobacter_tengcongensis/thermoanaerobacter_tengcongensis_ovlp_len.pbl
7782 2022-09-23 19:06 config/species/thermoanaerobacter_tengcongensis/thermoanaerobacter_tengcongensis_parameters.cfg
1403 2022-09-23 19:06 config/species/thermoanaerobacter_tengcongensis/thermoanaerobacter_tengcongensis_trans_shadow_bacterium.pbl
810 2022-09-23 19:06 config/species/thermoanaerobacter_tengcongensis/thermoanaerobacter_tengcongensis_weightmatrix.txt
2022-09-23 19:06 config/species/tomato/
407315 2022-09-23 19:06 config/species/tomato/tomato_exon_probs.pbl
65325 2022-09-23 19:06 config/species/tomato/tomato_igenic_probs.pbl
417171 2022-09-23 19:06 config/species/tomato/tomato_intron_probs.pbl
2057 2022-09-23 19:06 config/species/tomato/tomato_metapars.cfg
1355 2022-09-23 19:06 config/species/tomato/tomato_metapars.utr.cfg
7213 2022-09-23 19:06 config/species/tomato/tomato_parameters.cfg
124500 2022-09-23 19:06 config/species/tomato/tomato_utr_probs.pbl
810 2022-09-23 19:06 config/species/tomato/tomato_weightmatrix.txt
2022-09-23 19:06 config/species/toxoplasma/
333959 2022-09-23 19:06 config/species/toxoplasma/toxoplasma_exon_probs.pbl
46395 2022-09-23 19:06 config/species/toxoplasma/toxoplasma_igenic_probs.pbl
152860 2022-09-23 19:06 config/species/toxoplasma/toxoplasma_intron_probs.pbl
1858 2022-09-23 19:06 config/species/toxoplasma/toxoplasma_metaparameters.cfg
6393 2022-09-23 19:06 config/species/toxoplasma/toxoplasma_parameters.cfg
14446 2022-09-23 19:06 config/species/toxoplasma/toxoplasma_trans_shadow_partial_utr.pbl
99595 2022-09-23 19:06 config/species/toxoplasma/toxoplasma_utr_probs.pbl
810 2022-09-23 19:06 config/species/toxoplasma/toxoplasma_weightmatrix.txt
2022-09-23 19:06 config/species/tribolium2012/
548697 2022-09-23 19:06 config/species/tribolium2012/tribolium2012_exon_probs.pbl
550781 2022-09-23 19:06 config/species/tribolium2012/tribolium2012_exon_probs.pbl.HMM
223014 2022-09-23 19:06 config/species/tribolium2012/tribolium2012_exon_probs.pbl1
223016 2022-09-23 19:06 config/species/tribolium2012/tribolium2012_exon_probs.pbl2
222989 2022-09-23 19:06 config/species/tribolium2012/tribolium2012_exon_probs.pbl3
223039 2022-09-23 19:06 config/species/tribolium2012/tribolium2012_exon_probs.pbl4
97858 2022-09-23 19:06 config/species/tribolium2012/tribolium2012_igenic_probs.pbl
97818 2022-09-23 19:06 config/species/tribolium2012/tribolium2012_igenic_probs.pbl.HMM
32608 2022-09-23 19:06 config/species/tribolium2012/tribolium2012_igenic_probs.pbl1
32613 2022-09-23 19:06 config/species/tribolium2012/tribolium2012_igenic_probs.pbl2
32640 2022-09-23 19:06 config/species/tribolium2012/tribolium2012_igenic_probs.pbl3
32606 2022-09-23 19:06 config/species/tribolium2012/tribolium2012_igenic_probs.pbl4
266927 2022-09-23 19:06 config/species/tribolium2012/tribolium2012_intron_probs.pbl
267106 2022-09-23 19:06 config/species/tribolium2012/tribolium2012_intron_probs.pbl.HMM
135551 2022-09-23 19:06 config/species/tribolium2012/tribolium2012_intron_probs.pbl1
135568 2022-09-23 19:06 config/species/tribolium2012/tribolium2012_intron_probs.pbl2
135590 2022-09-23 19:06 config/species/tribolium2012/tribolium2012_intron_probs.pbl3
135556 2022-09-23 19:06 config/species/tribolium2012/tribolium2012_intron_probs.pbl4
2057 2022-09-23 19:06 config/species/tribolium2012/tribolium2012_metapars.cfg
1357 2022-09-23 19:06 config/species/tribolium2012/tribolium2012_metapars.utr.cfg
7113 2022-09-23 19:06 config/species/tribolium2012/tribolium2012_parameters.cfg
7081 2022-09-23 19:06 config/species/tribolium2012/tribolium2012_parameters.cfg.orig1
7081 2022-09-23 19:06 config/species/tribolium2012/tribolium2012_parameters.cfg.orig2
7089 2022-09-23 19:06 config/species/tribolium2012/tribolium2012_parameters.cfg.orig3
6853 2022-09-23 19:06 config/species/tribolium2012/tribolium2012_parameters.cfg.orig4
6853 2022-09-23 19:06 config/species/tribolium2012/tribolium2012_parameters.cfg.orig5
6853 2022-09-23 19:06 config/species/tribolium2012/tribolium2012_parameters.cfg.orig6
6853 2022-09-23 19:06 config/species/tribolium2012/tribolium2012_parameters.cfg.orig7
14389 2022-09-23 19:06 config/species/tribolium2012/tribolium2012_trans_shadow_partial_utr.pbl
152249 2022-09-23 19:06 config/species/tribolium2012/tribolium2012_utr_probs.pbl
155633 2022-09-23 19:06 config/species/tribolium2012/tribolium2012_utr_probs.pbl.HMM
810 2022-09-23 19:06 config/species/tribolium2012/tribolium2012_weightmatrix.txt
2022-09-23 19:06 config/species/trichinella/
311437 2022-09-23 19:06 config/species/trichinella/trichinella_exon_probs.pbl
43971 2022-09-23 19:06 config/species/trichinella/trichinella_igenic_probs.pbl
84491 2022-09-23 19:06 config/species/trichinella/trichinella_intron_probs.pbl
2057 2022-09-23 19:06 config/species/trichinella/trichinella_metapars.cfg
1355 2022-09-23 19:06 config/species/trichinella/trichinella_metapars.utr.cfg
7244 2022-09-23 19:06 config/species/trichinella/trichinella_parameters.cfg
117891 2022-09-23 19:06 config/species/trichinella/trichinella_utr_probs.pbl
810 2022-09-23 19:06 config/species/trichinella/trichinella_weightmatrix.txt
2022-09-23 19:06 config/species/ustilago/
1000552 2022-09-23 19:06 config/species/ustilago/ustilago_exon_probs.pbl
138590 2022-09-23 19:06 config/species/ustilago/ustilago_igenic_probs.pbl
173942 2022-09-23 19:06 config/species/ustilago/ustilago_intron_probs.pbl
4129 2022-09-23 19:06 config/species/ustilago/ustilago_parameters.cfg
800 2022-09-23 19:06 config/species/ustilago/ustilago_weightmatrix.txt
2022-09-23 19:06 config/species/ustilago_maydis/
328672 2022-09-23 19:06 config/species/ustilago_maydis/ustilago_maydis_exon_probs.pbl
45960 2022-09-23 19:06 config/species/ustilago_maydis/ustilago_maydis_igenic_probs.pbl
93835 2022-09-23 19:06 config/species/ustilago_maydis/ustilago_maydis_intron_probs.pbl
1860 2022-09-23 19:06 config/species/ustilago_maydis/ustilago_maydis_metapars.cfg
6769 2022-09-23 19:06 config/species/ustilago_maydis/ustilago_maydis_parameters.cfg
810 2022-09-23 19:06 config/species/ustilago_maydis/ustilago_maydis_weightmatrix.txt
2022-09-23 19:06 config/species/verticillium_albo_atrum1/
914370 2022-09-23 19:06 config/species/verticillium_albo_atrum1/verticillium_albo_atrum1_exon_probs.pbl
161783 2022-09-23 19:06 config/species/verticillium_albo_atrum1/verticillium_albo_atrum1_igenic_probs.pbl
347096 2022-09-23 19:06 config/species/verticillium_albo_atrum1/verticillium_albo_atrum1_intron_probs.pbl
2057 2022-09-23 19:06 config/species/verticillium_albo_atrum1/verticillium_albo_atrum1_metapars.cfg
1355 2022-09-23 19:06 config/species/verticillium_albo_atrum1/verticillium_albo_atrum1_metapars.utr.cfg
7393 2022-09-23 19:06 config/species/verticillium_albo_atrum1/verticillium_albo_atrum1_parameters.cfg
225742 2022-09-23 19:06 config/species/verticillium_albo_atrum1/verticillium_albo_atrum1_utr_probs.pbl
810 2022-09-23 19:06 config/species/verticillium_albo_atrum1/verticillium_albo_atrum1_weightmatrix.txt
2022-09-23 19:06 config/species/verticillium_longisporum1/
571201 2022-09-23 19:06 config/species/verticillium_longisporum1/verticillium_longisporum1_exon_probs.pbl
97157 2022-09-23 19:06 config/species/verticillium_longisporum1/verticillium_longisporum1_igenic_probs.pbl
239463 2022-09-23 19:06 config/species/verticillium_longisporum1/verticillium_longisporum1_intron_probs.pbl
2057 2022-09-23 19:06 config/species/verticillium_longisporum1/verticillium_longisporum1_metapars.cfg
1355 2022-09-23 19:06 config/species/verticillium_longisporum1/verticillium_longisporum1_metapars.utr.cfg
7452 2022-09-23 19:06 config/species/verticillium_longisporum1/verticillium_longisporum1_parameters.cfg
7396 2022-09-23 19:06 config/species/verticillium_longisporum1/verticillium_longisporum1_parameters.cfg.orig1
225742 2022-09-23 19:06 config/species/verticillium_longisporum1/verticillium_longisporum1_utr_probs.pbl
810 2022-09-23 19:06 config/species/verticillium_longisporum1/verticillium_longisporum1_weightmatrix.txt
2022-09-23 19:06 config/species/volvox/
267012 2022-09-23 19:06 config/species/volvox/volvox_exon_probs.pbl
32477 2022-09-23 19:06 config/species/volvox/volvox_igenic_probs.pbl
133047 2022-09-23 19:06 config/species/volvox/volvox_intron_probs.pbl
2057 2022-09-23 19:06 config/species/volvox/volvox_metapars.cfg
1125 2022-09-23 19:06 config/species/volvox/volvox_metapars.cgp.cfg
1356 2022-09-23 19:06 config/species/volvox/volvox_metapars.utr.cfg
7234 2022-09-23 19:06 config/species/volvox/volvox_parameters.cfg
80597 2022-09-23 19:06 config/species/volvox/volvox_utr_probs.pbl
810 2022-09-23 19:06 config/species/volvox/volvox_weightmatrix.txt
2022-09-23 19:06 config/species/wheat/
726 2022-09-23 19:06 config/species/wheat/README.txt
238130 2022-09-23 19:06 config/species/wheat/wheat_exon_probs.pbl
32474 2022-09-23 19:06 config/species/wheat/wheat_igenic_probs.pbl
126040 2022-09-23 19:06 config/species/wheat/wheat_intron_probs.pbl
7199 2022-09-23 19:06 config/species/wheat/wheat_parameters.cfg
82556 2022-09-23 19:06 config/species/wheat/wheat_utr_probs.pbl
810 2022-09-23 19:06 config/species/wheat/wheat_weightmatrix.txt
2022-09-23 19:06 config/species/yarrowia_lipolytica/
970670 2022-09-23 19:06 config/species/yarrowia_lipolytica/yarrowia_lipolytica_exon_probs.pbl
162185 2022-09-23 19:06 config/species/yarrowia_lipolytica/yarrowia_lipolytica_igenic_probs.pbl
348881 2022-09-23 19:06 config/species/yarrowia_lipolytica/yarrowia_lipolytica_intron_probs.pbl
1860 2022-09-23 19:06 config/species/yarrowia_lipolytica/yarrowia_lipolytica_metapars.cfg
1355 2022-09-23 19:06 config/species/yarrowia_lipolytica/yarrowia_lipolytica_metapars.utr.cfg
6945 2022-09-23 19:06 config/species/yarrowia_lipolytica/yarrowia_lipolytica_parameters.cfg
237729 2022-09-23 19:06 config/species/yarrowia_lipolytica/yarrowia_lipolytica_utr_probs.pbl
810 2022-09-23 19:06 config/species/yarrowia_lipolytica/yarrowia_lipolytica_weightmatrix.txt
2022-09-23 19:06 config/species/zebrafish/
904 2022-09-23 19:06 config/species/zebrafish/README.TXT
506153 2022-09-23 19:06 config/species/zebrafish/zebrafish_exon_probs.pbl
506116 2022-09-23 19:06 config/species/zebrafish/zebrafish_exon_probs.pbl.HMM
65200 2022-09-23 19:06 config/species/zebrafish/zebrafish_igenic_probs.pbl
65214 2022-09-23 19:06 config/species/zebrafish/zebrafish_igenic_probs.pbl.HMM
443594 2022-09-23 19:06 config/species/zebrafish/zebrafish_intron_probs.pbl
443595 2022-09-23 19:06 config/species/zebrafish/zebrafish_intron_probs.pbl.HMM
2057 2022-09-23 19:06 config/species/zebrafish/zebrafish_metapars.cfg
1356 2022-09-23 19:06 config/species/zebrafish/zebrafish_metapars.utr.cfg
7414 2022-09-23 19:06 config/species/zebrafish/zebrafish_parameters.cfg
810 2022-09-23 19:06 config/species/zebrafish/zebrafish_weightmatrix.txt
2022-09-23 19:06 docs/
5661 2022-09-23 19:06 docs/ABOUT.md
3224 2022-09-23 19:06 docs/AUGUSTUS-ON-WINDOWS.md
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