"Fossies" - the Fresh Open Source Software Archive  

Source code changes of the file "layer3/Executive.h" between
pymol-v2.1.0.tar.bz2 and pymol-open-source-2.2.0.tar.gz

About: PyMOL is a Python-enhanced molecular graphics tool. It excels at 3D visualization of proteins, small molecules, density, surfaces, and trajectories. It also includes molecular editing, ray tracing, and movies. Open Source version.

[ To the main PyMOL source changes report ]

Executive.h  (pymol-v2.1.0.tar.bz2):Executive.h  (pymol-open-source-2.2.0)
skipping to change at line 163 skipping to change at line 163
#define cExecutiveGroupOpen 3 #define cExecutiveGroupOpen 3
#define cExecutiveGroupClose 4 #define cExecutiveGroupClose 4
#define cExecutiveGroupToggle 5 #define cExecutiveGroupToggle 5
#define cExecutiveGroupAuto 6 #define cExecutiveGroupAuto 6
#define cExecutiveGroupUngroup 7 #define cExecutiveGroupUngroup 7
#define cExecutiveGroupEmpty 8 #define cExecutiveGroupEmpty 8
#define cExecutiveGroupPurge 9 #define cExecutiveGroupPurge 9
#define cExecutiveGroupExcise 10 #define cExecutiveGroupExcise 10
int ExecutiveGroup(PyMOLGlobals * G, const char *name, const char *members, int action, int quiet); int ExecutiveGroup(PyMOLGlobals * G, const char *name, const char *members, int action, int quiet);
int ExecutiveScrollTo(PyMOLGlobals * G, const char * name, int);
void ExecutiveInvalidateGroups(PyMOLGlobals * G, int force); void ExecutiveInvalidateGroups(PyMOLGlobals * G, int force);
void ExecutiveUpdateGroups(PyMOLGlobals * G, int force); void ExecutiveUpdateGroups(PyMOLGlobals * G, int force);
int *ExecutiveGetG3d(PyMOLGlobals * G); int *ExecutiveGetG3d(PyMOLGlobals * G);
int ExecutiveOrder(PyMOLGlobals * G, const char *s1, int sort, int location); int ExecutiveOrder(PyMOLGlobals * G, const char *s1, int sort, int location);
int ExecutiveFixChemistry(PyMOLGlobals * G, const char *s1, const char *s2, int invalidate, int ExecutiveFixChemistry(PyMOLGlobals * G, const char *s1, const char *s2, int invalidate,
int quiet); int quiet);
int ExecutiveGetAtomVertex(PyMOLGlobals * G, const char *s1, int state, int inde x, float *v); int ExecutiveGetAtomVertex(PyMOLGlobals * G, const char *s1, int state, int inde x, float *v);
int ExecutiveProcessPDBFile(PyMOLGlobals * G, CObject * origObj, int ExecutiveProcessPDBFile(PyMOLGlobals * G, CObject * origObj,
skipping to change at line 224 skipping to change at line 225
float cutoff, int cycles, int quiet, float cutoff, int cycles, int quiet,
const char *oname, int state1, int state2, const char *oname, int state1, int state2,
ExecutiveRMSInfo * rms_info, int transform, int reset, ExecutiveRMSInfo * rms_info, int transform, int reset,
float seq_wt, float radius, float scale, float base, float seq_wt, float radius, float scale, float base,
float coord_wt, float expect, int window, float ante); float coord_wt, float expect, int window, float ante);
void ExecutiveUpdateColorDepends(PyMOLGlobals * G, ObjectMolecule * mol); void ExecutiveUpdateColorDepends(PyMOLGlobals * G, ObjectMolecule * mol);
void ExecutiveUpdateCoordDepends(PyMOLGlobals * G, ObjectMolecule * mol); void ExecutiveUpdateCoordDepends(PyMOLGlobals * G, ObjectMolecule * mol);
int ExecutiveDist(PyMOLGlobals * G, float *result, int ExecutiveDist(PyMOLGlobals * G, float *result,
const char *nam, const char *s1, const char *s2, int mode, const char *nam, const char *s1, const char *s2, int mode,
float cutoff, int labels, int quiet, int reset, int state, int float cutoff, int labels, int quiet, int reset, int state, int
zoom); zoom,
int state1=-4, int state2=-4);
int ExecutiveBond(PyMOLGlobals * G, const char *s1, const char *s2, int order, i nt mode, int quiet); int ExecutiveBond(PyMOLGlobals * G, const char *s1, const char *s2, int order, i nt mode, int quiet);
int ExecutiveRevalence(PyMOLGlobals * G, const char *s1, const char *s2, const c har *src, int ExecutiveRevalence(PyMOLGlobals * G, const char *s1, const char *s2, const c har *src,
int target_state, int source_state, int reset, int quiet) ; int target_state, int source_state, int reset, int quiet) ;
int ExecutiveVdwFit(PyMOLGlobals * G, const char *s1, int state1, const char *s2 , int state2, int ExecutiveVdwFit(PyMOLGlobals * G, const char *s1, int state1, const char *s2 , int state2,
float buffer, int quiet); float buffer, int quiet);
#ifdef _WEBGL #ifdef _WEBGL
#else #else
int ExecutiveIterate(PyMOLGlobals * G, const char *str1, const char *expr, int r ead_only, int quiet, int ExecutiveIterate(PyMOLGlobals * G, const char *str1, const char *expr, int r ead_only, int quiet,
PyObject * space); PyObject * space);
#endif #endif
skipping to change at line 336 skipping to change at line 338
float *pos, int quiet); float *pos, int quiet);
void ExecutiveDoZoom(PyMOLGlobals * G, CObject * obj, int is_new, int zoom, int quiet); void ExecutiveDoZoom(PyMOLGlobals * G, CObject * obj, int is_new, int zoom, int quiet);
int ExecutiveWindowZoom(PyMOLGlobals * G, const char *name, float buffer, int ExecutiveWindowZoom(PyMOLGlobals * G, const char *name, float buffer,
int state, int inclusive, float animate, int quiet); int state, int inclusive, float animate, int quiet);
int ExecutiveGetMoment(PyMOLGlobals * G, const char *name, double *mi, int state ); int ExecutiveGetMoment(PyMOLGlobals * G, const char *name, double *mi, int state );
const char **ExecutiveGetChains(PyMOLGlobals * G, const char *sele, int state); const char **ExecutiveGetChains(PyMOLGlobals * G, const char *sele, int state);
void ExecutiveOrient(PyMOLGlobals * G, const char *sele, double *mi, void ExecutiveOrient(PyMOLGlobals * G, const char *sele, double *mi,
int state, float animate, int complete, float buffer, int q uiet); int state, float animate, int complete, float buffer, int q uiet);
char *ExecutiveSeleToPDBStr(PyMOLGlobals * G, const char *s1, int state, int con
ectFlag,
int mode, const char *ref_object, int ref_state,
ObjectMolecule * single_object, int quiet);
char *ExecutiveNameToSeqAlignStrVLA(PyMOLGlobals * G, const char *name, int stat e, int format, char *ExecutiveNameToSeqAlignStrVLA(PyMOLGlobals * G, const char *name, int stat e, int format,
int quiet); int quiet);
int ExecutiveStereo(PyMOLGlobals * G, int flag); int ExecutiveStereo(PyMOLGlobals * G, int flag);
void ExecutiveCopy(PyMOLGlobals * G, const char *src, const char *dst, int zoom) ; void ExecutiveCopy(PyMOLGlobals * G, const char *src, const char *dst, int zoom) ;
float ExecutiveOverlap(PyMOLGlobals * G, const char *s1, int state1, const char *s2, int state2, float ExecutiveOverlap(PyMOLGlobals * G, const char *s1, int state1, const char *s2, int state2,
float adjust); float adjust);
int ExecutiveCountStates(PyMOLGlobals * G, const char *s1); int ExecutiveCountStates(PyMOLGlobals * G, const char *s1);
void ExecutiveSymExp(PyMOLGlobals * G, const char *name, const char *obj, const char *sele, float cutoff, void ExecutiveSymExp(PyMOLGlobals * G, const char *name, const char *obj, const char *sele, float cutoff,
int segi, int quiet); int segi, int quiet);
skipping to change at line 503 skipping to change at line 502
int ExecutiveGetObjectColorIndex(PyMOLGlobals * G, const char *name); int ExecutiveGetObjectColorIndex(PyMOLGlobals * G, const char *name);
int ExecutiveSetOnOffBySele(PyMOLGlobals * G, const char *name, int onoff); int ExecutiveSetOnOffBySele(PyMOLGlobals * G, const char *name, int onoff);
int ExecutiveSetName(PyMOLGlobals * G, const char *old_name, const char *new_nam e); int ExecutiveSetName(PyMOLGlobals * G, const char *old_name, const char *new_nam e);
int ExecutiveSetDrag(PyMOLGlobals * G, const char *name, int quiet,int mode); int ExecutiveSetDrag(PyMOLGlobals * G, const char *name, int quiet,int mode);
int ExecutiveGetActiveSeleName(PyMOLGlobals * G, char *name, int create_new, int log); int ExecutiveGetActiveSeleName(PyMOLGlobals * G, char *name, int create_new, int log);
int ExecutiveGetActiveSele(PyMOLGlobals * G); int ExecutiveGetActiveSele(PyMOLGlobals * G);
int ExecutiveGetActiveAlignmentSele(PyMOLGlobals * G); int ExecutiveGetActiveAlignmentSele(PyMOLGlobals * G);
CObject *ExecutiveGetExistingCompatible(PyMOLGlobals * G, const char *oname, int type); CObject *ExecutiveGetExistingCompatible(PyMOLGlobals * G, const char *oname, int type);
int ExecutiveAngle(PyMOLGlobals * G, float *result, int ExecutiveAngle(PyMOLGlobals * G, float *result,
const char *nam, const char *s1, const char *s2, const char * s3, int mode, const char *nam, const char *s1, const char *s2, const char * s3, int mode,
int labels, int reset, int zoom, int quiet, int state); int labels, int reset, int zoom, int quiet, int state,
int state1=-4, int state2=-4, int state3=-4);
int ExecutiveDihedral(PyMOLGlobals * G, float *result, int ExecutiveDihedral(PyMOLGlobals * G, float *result,
const char *nam, const char *s1, const char *s2, const cha r *s3, const char *s4, int mode, const char *nam, const char *s1, const char *s2, const cha r *s3, const char *s4, int mode,
int labels, int reset, int zoom, int quiet, int state); int labels, int reset, int zoom, int quiet, int state);
int ExecutiveMatrixCopy2(PyMOLGlobals * G, int ExecutiveMatrixCopy2(PyMOLGlobals * G,
CObject * source_obj, CObject * target_obj, CObject * source_obj, CObject * target_obj,
int source_mode, int target_mode, int source_mode, int target_mode,
int source_state, int target_state, int source_state, int target_state,
int target_undo, int log, int quiet); int target_undo, int log, int quiet);
 End of changes. 4 change blocks. 
7 lines changed or deleted 6 lines changed or added
To the Header Files section of the PyMOL source changes report or the top of this page
Mainly generated by pkgdiff using rfcdiff
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