is a Python-enhanced molecular graphics tool. It excels at 3D visualization of proteins, small molecules, density, surfaces, and trajectories. It also includes molecular editing, ray tracing, and movies. Open Source version.
| cmd2.py (pymol-open-source-2.2.0) | : | cmd2.py (pymol-open-source-2.3.0) |
|---|
| from pymol import cmd as global_cmd | | from pymol import cmd as global_cmd |
| import pymol | | import pymol |
| import inspect | | import inspect |
| import itertools | | import itertools |
| import weakref | | import weakref |
| | |
|
| #most recently created Cmd (for now) | | |
| cmd = None | | |
| | | |
| class Cmd: | | class Cmd: |
| ''' | | ''' |
| Proxy for the pymol.cmd module for multiple instances support. | | Proxy for the pymol.cmd module for multiple instances support. |
| ''' | | ''' |
| | |
| def __init__(self, _pymol, _COb): | | def __init__(self, _pymol, _COb): |
|
| global cmd | | |
| cmd = weakref.proxy(self) | | |
| self._weakref = weakref.ref(self) | | self._weakref = weakref.ref(self) |
| self._weakrefproxy = weakref.proxy(self) | | self._weakrefproxy = weakref.proxy(self) |
| | |
| # store parent | | # store parent |
| | |
| self._pymol = weakref.proxy(_pymol) | | self._pymol = weakref.proxy(_pymol) |
| | |
| # store C object for easy access | | # store C object for easy access |
| | |
| self._COb = _COb | | self._COb = _COb |
| | | |
| End of changes. 2 change blocks. |
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| 5 lines changed or deleted | | 0 lines changed or added |
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"Fossies" - the Fresh Open Source Software Archive 