is a Python-enhanced molecular graphics tool. It excels at 3D visualization of proteins, small molecules, density, surfaces, and trajectories. It also includes molecular editing, ray tracing, and movies. Open Source version.
| volume.py (pymol-open-source-2.2.0) | : | volume.py (pymol-open-source-2.3.0) |
|---|
| | |
| skipping to change at line 675 | | skipping to change at line 675 |
|---|
| def setHistogram(self, histogram): | | def setHistogram(self, histogram): |
| """ | | """ |
| Sets histogram of the volume. | | Sets histogram of the volume. |
| | |
| @param histogram: Volume histogram: min value, max value, avg value, | | @param histogram: Volume histogram: min value, max value, avg value, |
| std deviation, value0, value1, value2... | | std deviation, value0, value1, value2... |
| @type histogram: list of floats | | @type histogram: list of floats |
| """ | | """ |
| self.vmin = histogram[0] | | self.vmin = histogram[0] |
| self.vmax = histogram[1] | | self.vmax = histogram[1] |
|
| | |
| | # check for flat data (useless, but avoid errors in GUI) |
| | if self.vmin == self.vmax: |
| | self.vmin -= 1.0 |
| | self.vmax += 1.0 |
| | |
| self.original_vmin = self.vmin | | self.original_vmin = self.vmin |
| self.original_vmax = self.vmax | | self.original_vmax = self.vmax |
| self.path = [] | | self.path = [] |
| if len(histogram[4:]) == 0: | | if len(histogram[4:]) == 0: |
| return | | return |
| xstep = 1.0 / len(histogram[4:]) | | xstep = 1.0 / len(histogram[4:]) |
| max_value = max(histogram[4:]) | | max_value = max(histogram[4:]) |
| if max_value == 0.0: | | if max_value == 0.0: |
| return | | return |
| ynorm = 1.0 / max_value | | ynorm = 1.0 / max_value |
| | | |
| End of changes. 1 change blocks. |
|---|
| 0 lines changed or deleted | | 6 lines changed or added |
|---|
"Fossies" - the Fresh Open Source Software Archive 