"Fossies" - the Fresh Open Source Software Archive  

Source code changes report for "GROMACS" between the packages
gromacs-5.1.3.tar.gz and gromacs-5.1.4.tar.gz

About: GROMACS performs molecular dynamics, i.e. simulates the Newtonian equations of motion for systems with hundreds to millions of particles (designed for biochemical molecules but used also for e.g. polymers).

Summary:

The "GROMACS" source code changed by about 0.02% and now consists of 4758 files.

Related Informations:

None found by Fossies.

Changes In Files (According File Type):

File TypeTotalAddedRemovedChanged
Header file 879 0 0 3
C program 2045 0 0 4
C++ program 344 1 0 7
Patch 2 0 0 0
Fortran program 3 0 0 0
Perl program 5 0 0 0
Python program 23 0 0 0
Shell program 16 0 0 0
Awk program 4 0 0 0
Python compiled program 1 0 0 0
Automake file 3 0 0 0
CMake file 175 0 0 2
Configuration file 1 0 0 0
Lex program 1 0 0 0
Makefile 2 0 0 0
Man page 96 0 0 96
XML document 235 0 0 0
Yacc program 1 0 0 0
BibTeX document 3 0 0 0
DOS Batch file 3 0 0 0
Doxygen file 8 0 0 0
DTD file 1 0 0 0
MS office document 15 0 0 0
PostScript file 63 0 0 0
RST file 28 0 0 0
TeX document 18 0 0 0
XML style sheet 9 0 0 0
YAML file 1 0 0 0
Data file 51 0 0 0
Image file 5 0 0 0
PDF file 6 0 0 0
Vector Image file 42 0 0 0
Directory 195 0 0 0
Information file 4 0 0 1
License 6 0 0 0
Readme file 14 0 0 0
Text file 430 0 0 4
Other 20 0 0 0
Total Files475810117



Header Files (3 of 879):

NameStatusDeltaVisual Diff
src/gromacs/ewald/long-range-correction.h changed 6.5% diff
src/gromacs/legacyheaders/force.h changed 1.6% diff
src/gromacs/legacyheaders/types/forcerec.h changed 0.9% diff

C Programs (4 of 2045):

NameStatusDeltaVisual Diff
src/gromacs/mdlib/nbnxn_cuda/nbnxn_cuda_kernel.cuh changed 1.4% diff
src/gromacs/mdlib/nbnxn_ocl/nbnxn_ocl_kernel_amd.clh changed 1.8% diff
src/gromacs/mdlib/nbnxn_ocl/nbnxn_ocl_kernel_nowarp.clh changed 1.8% diff
src/gromacs/mdlib/nbnxn_ocl/nbnxn_ocl_kernel_nvidia.clh changed 1.8% diff

C++ Programs (8 of 344):

NameStatusDeltaVisual Diff
cmake/TestGlibcVersion.cpp added
src/gromacs/domdec/domdec_topology.cpp changed 0.05% diff
src/gromacs/ewald/long-range-correction.cpp changed 4.1% diff
src/gromacs/mdlib/force.cpp changed 0.6% diff
src/gromacs/mdlib/forcerec.cpp changed 0.9% diff
src/gromacs/mdlib/minimize.cpp changed 0.6% diff
src/gromacs/mdlib/update.cpp changed 0.9% diff
src/programs/mdrun/md.cpp changed 0.1% diff

CMake Files (2 of 175):

NameStatusDeltaVisual Diff
cmake/gmxManageNvccConfig.cmake changed 8.1% diff
cmake/gmxVersionInfo.cmake changed 0.8% diff

Man Pages (all 96):

NameStatusDeltaVisual Diff
docs/man/gmx-anadock.1 changed 6.5% diff
docs/man/gmx-anaeig.1 changed 1.5% diff
docs/man/gmx-analyze.1 changed 1.1% diff
docs/man/gmx-angle.1 changed 2.4% diff
docs/man/gmx-bar.1 changed 1.6% diff
docs/man/gmx-bundle.1 changed 3.1% diff
docs/man/gmx-check.1 changed 2.8% diff
docs/man/gmx-chi.1 changed 1.2% diff
docs/man/gmx-cluster.1 changed 1.3% diff
docs/man/gmx-clustsize.1 changed 2.6% diff
docs/man/gmx-confrms.1 changed 4.1% diff
docs/man/gmx-convert-tpr.1 changed 3.5% diff
docs/man/gmx-covar.1 changed 2.7% diff
docs/man/gmx-current.1 changed 1.9% diff
docs/man/gmx-density.1 changed 1.8% diff
docs/man/gmx-densmap.1 changed 2.5% diff
docs/man/gmx-densorder.1 changed 3.7% diff
docs/man/gmx-dielectric.1 changed 2.9% diff
docs/man/gmx-dipoles.1 changed 1.4% diff
docs/man/gmx-disre.1 changed 3.2% diff
docs/man/gmx-distance.1 changed 2.5% diff
docs/man/gmx-do_dssp.1 changed 2.5% diff
docs/man/gmx-dos.1 changed 2.8% diff
docs/man/gmx-dump.1 changed 5.2% diff
docs/man/gmx-dyecoupl.1 changed 3.7% diff
docs/man/gmx-dyndom.1 changed 4.1% diff
docs/man/gmx-editconf.1 changed 1.3% diff
docs/man/gmx-eneconv.1 changed 4.5% diff
docs/man/gmx-enemat.1 changed 2.5% diff
docs/man/gmx-energy.1 changed 1.0% diff
docs/man/gmx-filter.1 changed 3.5% diff
docs/man/gmx-freevolume.1 changed 2.7% diff
docs/man/gmx-gangle.1 changed 1.9% diff
docs/man/gmx-genconf.1 changed 4.1% diff
docs/man/gmx-genion.1 changed 3.5% diff
docs/man/gmx-genrestr.1 changed 2.8% diff
docs/man/gmx-grompp.1 changed 1.5% diff
docs/man/gmx-gyrate.1 changed 3.2% diff
docs/man/gmx-h2order.1 changed 4.2% diff
docs/man/gmx-hbond.1 changed 1.3% diff
docs/man/gmx-helix.1 changed 3.2% diff
docs/man/gmx-helixorient.1 changed 3.3% diff
docs/man/gmx-help.1 changed 26.4% diff
docs/man/gmx-hydorder.1 changed 4.0% diff
docs/man/gmx-insert-molecules.1 changed 2.8% diff
docs/man/gmx-lie.1 changed 4.8% diff
docs/man/gmx-make_edi.1 changed 1.0% diff
docs/man/gmx-make_ndx.1 changed 5.3% diff
docs/man/gmx-mdmat.1 changed 4.7% diff
docs/man/gmx-mdrun.1 changed 0.7% diff
docs/man/gmx-mindist.1 changed 2.8% diff
docs/man/gmx-mk_angndx.1 changed 8.6% diff
docs/man/gmx-morph.1 changed 4.0% diff
docs/man/gmx-msd.1 changed 2.2% diff
docs/man/gmx-nmeig.1 changed 2.7% diff
docs/man/gmx-nmens.1 changed 5.1% diff
docs/man/gmx-nmtraj.1 changed 4.1% diff
docs/man/gmx-order.1 changed 2.7% diff
docs/man/gmx-pairdist.1 changed 2.1% diff
docs/man/gmx-pdb2gmx.1 changed 1.0% diff
docs/man/gmx-pme_error.1 changed 5.4% diff
docs/man/gmx-polystat.1 changed 3.4% diff
docs/man/gmx-potential.1 changed 3.5% diff
docs/man/gmx-principal.1 changed 4.8% diff
docs/man/gmx-rama.1 changed 7.4% diff
docs/man/gmx-rdf.1 changed 2.1% diff
docs/man/gmx-rms.1 changed 2.0% diff
docs/man/gmx-rmsdist.1 changed 2.9% diff
docs/man/gmx-rmsf.1 changed 3.0% diff
docs/man/gmx-rotacf.1 changed 3.4% diff
docs/man/gmx-rotmat.1 changed 3.7% diff
docs/man/gmx-saltbr.1 changed 6.1% diff
docs/man/gmx-sans.1 changed 3.1% diff
docs/man/gmx-sasa.1 changed 2.2% diff
docs/man/gmx-saxs.1 changed 5.7% diff
docs/man/gmx-select.1 changed 1.5% diff
docs/man/gmx-sham.1 changed 1.8% diff
docs/man/gmx-sigeps.1 changed 6.0% diff
docs/man/gmx-solvate.1 changed 2.4% diff
docs/man/gmx-sorient.1 changed 3.0% diff
docs/man/gmx-spatial.1 changed 2.3% diff
docs/man/gmx-spol.1 changed 3.6% diff
docs/man/gmx-tcaf.1 changed 2.3% diff
docs/man/gmx-traj.1 changed 2.1% diff
docs/man/gmx-trjcat.1 changed 3.2% diff
docs/man/gmx-trjconv.1 changed 0.9% diff
docs/man/gmx-trjorder.1 changed 3.3% diff
docs/man/gmx-tune_pme.1 changed 0.8% diff
docs/man/gmx-vanhove.1 changed 2.7% diff
docs/man/gmx-velacc.1 changed 3.5% diff
docs/man/gmx-view.1 changed 5.5% diff
docs/man/gmx-wham.1 changed 0.9% diff
docs/man/gmx-wheel.1 changed 8.0% diff
docs/man/gmx-x2top.1 changed 2.9% diff
docs/man/gmx-xpm2ps.1 changed 2.1% diff
docs/man/gmx.1 changed 1.0% diff

Information Files (1 of 4):

NameStatusDeltaVisual Diff
INSTALL changed 0.5% diff

Text Files (4 of 430):

NameStatusDeltaVisual Diff
share/top/amber03.ff/aminoacids.rtp changed 1.8% diff
share/top/charmm27.ff/aminoacids.hdb changed 3.8% diff
share/top/oplsaa.ff/aminoacids.hdb changed 3.5% diff
share/top/oplsaa.ff/aminoacids.rtp changed 4.8% diff

Packages Compared:

gromacs-5.1.3.tar.gz
gromacs-5.1.4.tar.gz


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