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Source code changes of the file "config/species/neurospora/neurospora_parameters.cfg" between
augustus-3.3.2.tar.gz and augustus-3.3.3.tar.gz

About: AUGUSTUS is a program that predicts genes in eukaryotic genomic sequences.

neurospora_parameters.cfg  (augustus-3.3.2):neurospora_parameters.cfg  (augustus-3.3.3)
# #
# Parameters for Neurospora crassa (based on Broad annotations, v2) # Parameters for Neurospora crassa (based on Broad annotations, v2)
# #
# date : 15-AUG-2005 # date : 15-AUG-2005
# #
# #
# Properties for augustus # Properties for augustus
#------------------------------------ #------------------------------------
/augustus/verbosity 3 # 0-3, 0: only print the neccessary /augustus/verbosity 3 # 0-3, 0: only print the necessary
maxDNAPieceSize 200000 # maximum segment that is predicted in one piece maxDNAPieceSize 200000 # maximum segment that is predicted in one piece
stopCodonExcludedFromCDS false # make this 'true' if the CDS in the training se t do not include the stop codon stopCodonExcludedFromCDS false # make this 'true' if the CDS in the training se t do not include the stop codon
# gff output options: # gff output options:
protein on # output predicted protein sequence protein on # output predicted protein sequence
codingseq off # output the coding sequence codingseq off # output the coding sequence
cds on # output 'cds' as feature for exons cds on # output 'cds' as feature for exons
start on # output start codons (translation start) start on # output start codons (translation start)
stop on # output stop codons (translation stop) stop on # output stop codons (translation stop)
introns off # output introns introns off # output introns
 End of changes. 1 change blocks. 
1 lines changed or deleted 1 lines changed or added

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