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Source code changes of the file "config/model/trans_singlestrand_atleastone.pbl" between
augustus-3.3.2.tar.gz and augustus-3.3.3.tar.gz

About: AUGUSTUS is a program that predicts genes in eukaryotic genomic sequences.

trans_singlestrand_atleastone.pbl  (augustus-3.3.2):trans_singlestrand_atleastone.pbl  (augustus-3.3.3)
# #
# Transition probabilities and initial Probabilities for the overall HMM # Transition probabilities and initial Probabilities for the overall HMM
# #
# number of states # number of states
25 25
# #
# Transition probabilities of the Generalised Hidden-Markov Model # Transition probabilities of the Generalised Hidden-Markov Model
# Date: 19.05.2003 # Date: 19.05.2003
# Initial probabilities (a priori probs for a state ending at a # Initial probabilities (a priori probs for a state ending at a
# certain position, e.g. the position before the first nukleotide in # certain position, e.g. the position before the first nucleotide in
# the sequence or the last position. # the sequence or the last position.
# only non-zero probabilities # only non-zero probabilities
[Initial] [Initial]
# number of states where a start is possible # number of states where a start is possible
1 1
# state prob statename # state prob statename
0 1 # start intergenic region 0 1 # start intergenic region
# Terminal probabilities (a priori probs for a state ending at # Terminal probabilities (a priori probs for a state ending at
# the last position. # the last position.
# only non-zero probabilities neccessary # only non-zero probabilities necessary
[Terminal] [Terminal]
# number of states where terminating is possible # number of states where terminating is possible
1 1
# state prob statename # state prob statename
24 1 # end intergenic region 24 1 # end intergenic region
# #
# Transition probabilities # Transition probabilities
# only non-zero probabilities # only non-zero probabilities
[Transition] [Transition]
 End of changes. 2 change blocks. 
2 lines changed or deleted 2 lines changed or added

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